RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 CELP19835 753 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 RAB3AP20336 220 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 NPBWR2P48146 333 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 POU3F4P49335 361 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 CAV3P56539 151 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 BDH1Q02338 343 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 KISS1Q15726 138 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 PNLDC1Q8NA58 520 aaKnown RBP16.42■□□□□ 0.22
CPSF1-209ENST00000532725 RFT1Q96AA3 541 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 UPRTQ96BW1 309 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 OR5M11Q96RB7 305 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 ZNF184Q99676 751 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-209ENST00000532725 DCTN5Q9BTE1 182 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 CNTD2Q9H8S5 307 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 NEK6Q9HC98 313 aa16.42■□□□□ 0.22
CPSF1-209ENST00000532725 SLC25A10Q9UBX3 287 aaPredicted RBP16.42■□□□□ 0.22
CPSF1-209ENST00000532725 IGKV1-12A0A0C4DH73 117 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 PNMA8CA0A1B0GUJ8 204 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 ZNF879B4DU55 563 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 DENRO43583 198 aaKnown RBP16.41■□□□□ 0.22
CPSF1-209ENST00000532725 RGS10O43665 173 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 IGKV1D-12P01611 117 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 BCL3P20749 454 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 FGF12P61328 243 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 SPHARQ15513 63 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 Q499Y3 187 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 RBM48Q5RL73 367 aaKnown RBP16.41■□□□□ 0.22
CPSF1-209ENST00000532725 ZNF561Q8N587 486 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 OR51A2Q8NGJ7 313 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 C8orf46Q8TAG6 207 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 DMRTB1Q96MA1 342 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 SEBOXQ9HB31 216 aaPredicted RBP16.41■□□□□ 0.22
CPSF1-209ENST00000532725 TAS2R4Q9NYW5 299 aa16.41■□□□□ 0.22
CPSF1-209ENST00000532725 ANGPTL7O43827 346 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 GPX5O75715 221 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 CYB5AP00167 134 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 ALDOBP05062 364 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 HCKP08631 526 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 IGFBP3P17936 291 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-209ENST00000532725 CEBPDP49716 269 aaPredicted RBP16.4■□□□□ 0.22
CPSF1-209ENST00000532725 ZP1P60852 638 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 PRSS48Q7RTY5 328 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 Q8IYB0 196 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 SAXO1Q8IYX7 474 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 ORAI1Q96D31 301 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 RBFOX1Q9NWB1 397 aaKnown RBP16.4■□□□□ 0.22
CPSF1-209ENST00000532725 OR14J1Q9UGF5 321 aa16.4■□□□□ 0.22
CPSF1-209ENST00000532725 FBN1P35555 2871 aaKnown RBP16.39■□□□□ 0.21
CPSF1-209ENST00000532725 TRBV5-7A0A0A0MS05 114 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 KDM4BO94953 1096 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 MMP9P14780 707 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 NDUFB7P17568 137 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 EPHA1P21709 976 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 ARF6P62330 175 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 FAM58AQ8N1B3 248 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 ZSCAN4Q8NAM6 433 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-209ENST00000532725 OR52N4Q8NGI2 321 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 OR5D18Q8NGL1 313 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 NUP50Q9UKX7 468 aa16.39■□□□□ 0.21
CPSF1-209ENST00000532725 SFTPBP07988 381 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 CHRM2P08172 466 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 SCGB2A2Q13296 93 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 MED22Q15528 200 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 TUSC1Q2TAM9 212 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 ARMCX4Q5H9R4 360 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 TMEM185AQ8NFB2 350 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 H1FXQ92522 213 aaKnown RBP16.38■□□□□ 0.21
CPSF1-209ENST00000532725 EMG1Q92979 244 aaKnown RBP16.38■□□□□ 0.21
CPSF1-209ENST00000532725 WDFY2Q96P53 400 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 OR14A2Q96R54 314 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 SIRPDQ9H106 197 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 RHOFQ9HBH0 211 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 HMG20AQ9NP66 347 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 TMEM138Q9NPI0 162 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 IL36RNQ9UBH0 155 aa16.38■□□□□ 0.21
CPSF1-209ENST00000532725 A0A1W2PPK0 400 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 K7N7A8 449 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 PIN1P1O15428 100 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 MAGEB3O15480 346 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 TOX4O94842 621 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 IGHV4-38-2P0DP08 117 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 TMEM225BP0DP42 221 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 CALCBP10092 127 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 TGFBR2P37173 567 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 COL10A1Q03692 680 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 GPR50Q13585 617 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 ZNF146Q15072 292 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 UNQ9370/PRO34162Q6UXP9 181 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 ASCL4Q6XD76 172 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 SATL1Q86VE3 508 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 TBX15Q96SF7 602 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 FAM234AQ9H0X4 552 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 OCEL1Q9H607 264 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 ELL3Q9HB65 397 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-209ENST00000532725 ZNF69Q9UC07 566 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 KPTNQ9Y664 436 aa16.37■□□□□ 0.21
CPSF1-209ENST00000532725 ZNF737O75373 536 aa16.36■□□□□ 0.21
CPSF1-209ENST00000532725 TK1P04183 234 aa16.36■□□□□ 0.21
CPSF1-209ENST00000532725 CAPZA1P52907 286 aa16.36■□□□□ 0.21
CPSF1-209ENST00000532725 PPP3R1P63098 170 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms