RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MMP16P51512 607 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF770Q6IQ21 691 aaPredicted RBP13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF519Q8TB69 540 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ITLN1Q8WWA0 313 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 PCGF1Q9BSM1 259 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 DLL3Q9NYJ7 618 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 PPIAL4EA0A075B759 164 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 PPIAL4DF5H284 164 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 J3QT63 122 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 PPIAL4FP0DN26 164 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 KITLGP21583 273 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 FAHD2BQ6P2I3 314 aaPredicted RBP13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF546Q86UE3 836 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 FAHD2AQ96GK7 314 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 TAS2R3Q9NYW6 316 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 TMA7Q9Y2S6 64 aaKnown RBP13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 PPIAL4AQ9Y536 164 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 LY6G6EA0A0G2JKS1 128 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 OR5H1A6NKK0 313 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 RFPL4AA6NLU0 287 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 RFPL4AL1F8VTS6 287 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF354AO60765 605 aaPredicted RBP13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 CRHP06850 196 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ZBTB25P24278 435 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 NAA40Q86UY6 237 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 ADAT3Q96EY9 351 aaPredicted RBP13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 TMEM246Q9BRR3 403 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 RTN4RQ9BZR6 473 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 CSAG2Q9Y5P2 127 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 U3KQA8 63 aa13.7□□□□□ -0.22
PPFIA1-222ENST00000532504 GEMIN2O14893 280 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 IFNA1P01562 189 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 BAXQ07812 192 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 RIPPLY2Q5TAB7 128 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 ATPAF1Q5TC12 328 aaPredicted RBP13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 HPSE2Q8WWQ2 592 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 MED30Q96HR3 178 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 FBXO24O75426 580 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 HIST1H1DP16402 221 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 RPL19P84098 196 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 TMEM268Q5VZI3 342 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 SULT4A1Q9BR01 284 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 CYB5R1Q9UHQ9 305 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 PURGQ9UJV8 347 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 RALYQ9UKM9 306 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 BOLA2-SMG1P6H3BVE0 249 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 SSX4O60224 188 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 TPPPO94811 219 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 TXNDC12O95881 172 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 PIGPP57054 158 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF626Q68DY1 528 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 OR2W3Q7Z3T1 314 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 IGHA1P01876 353 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 LIMK1P53667 647 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF826PQ6ZT77 177 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 OR5A2Q8NGI9 324 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF665Q9H7R5 613 aa13.69□□□□□ -0.22
PPFIA1-222ENST00000532504 TSC2P49815 1807 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 IGLV1-36A0A0B4J1U3 117 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 AGPAT2O15120 278 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 TTRP02766 147 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 PPP3CBP16298 524 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 UBE2MP61081 183 aaKnown RBP13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 NHLRC1Q6VVB1 395 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 DLL4Q9NR61 685 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 LIN7CQ9NUP9 197 aaKnown RBP13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 OR8U8P0C7N1 319 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 ERP29P30040 261 aaKnown RBP13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 FGF9P31371 208 aaPredicted RBP13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 CELF2-AS1Q8N7Q2 184 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 LHFPL6Q9Y693 200 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 SPICQ8N5J4 248 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 RTN4IP1Q8WWV3 396 aaPredicted RBP13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 GPX7Q96SL4 187 aaPredicted RBP13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 ELOVL5Q9NYP7 299 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 OR6C3Q9NZP0 311 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 RPH3ALQ9UNE2 315 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 PCNX2A6NKB5 2137 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 OGG1O15527 345 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 ZG16O60844 167 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 GYPAP02724 150 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 SSTR2P30874 369 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 Q3ZCU0 254 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 MUC15Q8N387 334 aa13.68□□□□□ -0.22
PPFIA1-222ENST00000532504 SPNS3Q6ZMD2 512 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 CCL13Q99616 98 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 UBQLN2Q9UHD9 624 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 FLVCR2Q9UPI3 526 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 TMEM229AB2RXF0 380 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 THY1P04216 161 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 KLK2P20151 261 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 PRRX1P54821 245 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 PIGYQ3MUY2 71 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 TRAV8-7A0A075B6U6 113 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 LHX2P50458 406 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 CCL19Q99731 98 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 MRPL22Q9NWU5 206 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms