RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 AWAT2Q6E213 333 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 ZNF826PQ6ZT77 177 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 OR2W3Q7Z3T1 314 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 RNF144BQ7Z419 303 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 NR2C2APQ86WQ0 139 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 OR4D6Q8NGJ1 314 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 OR5D18Q8NGL1 313 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 RAB1CQ92928 201 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 SLC25A28Q96A46 364 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 RFT1Q96AA3 541 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 DGCR14Q96DF8 476 aaKnown RBP10.5□□□□□ -0.73
COPB1-208ENST00000532088 WNT10AQ9GZT5 417 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 DCSTAMPQ9H295 470 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 PLGRKTQ9HBL7 147 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 CACNG2Q9Y698 323 aa10.5□□□□□ -0.73
COPB1-208ENST00000532088 DYSFO75923 2080 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 CRYBG3Q68DQ2 2970 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 PPIAL4EA0A075B759 164 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 TRAV38-1A0A0B4J264 116 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 IGKV1-12A0A0C4DH73 117 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 IGHV3-64DA0A0J9YX35 117 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 PPIAL4DF5H284 164 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.49□□□□□ -0.73
COPB1-208ENST00000532088 LGALS8O00214 317 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 SPRY1O43609 319 aaPredicted RBP10.49□□□□□ -0.73
COPB1-208ENST00000532088 CYB5R3P00387 301 aaPredicted RBP10.49□□□□□ -0.73
COPB1-208ENST00000532088 KNG1P01042 644 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 IGKV1D-12P01611 117 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 IGHV2-70P01814 119 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 PPIAL4FP0DN26 164 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 CALCBP10092 127 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 GLRA1P23415 457 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 OR10A3P58181 314 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 FGF12P61328 243 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 BTG1P62324 171 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 RSU1Q15404 277 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 FAM189A2Q15884 450 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 FIP1L1Q6UN15 594 aaKnown RBP10.49□□□□□ -0.73
COPB1-208ENST00000532088 GLIPR1L1Q6UWM5 242 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 ACP7Q6ZNF0 438 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 C1QL2Q7Z5L3 287 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 LINC00596Q86U02 117 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 MUC20Q8N307 709 aaPredicted RBP10.49□□□□□ -0.73
COPB1-208ENST00000532088 OR51T1Q8NGJ9 327 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 C10orf105Q8TEF2 133 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 FAM168AQ92567 244 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 SLAMF9Q96A28 289 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 PTX4Q96A99 478 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 C1orf147Q96MC9 270 aaPredicted RBP10.49□□□□□ -0.73
COPB1-208ENST00000532088 PIMREGQ9BSJ6 248 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 CST11Q9H112 138 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 DNTTIP1Q9H147 329 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 ABRACLQ9P1F3 81 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 PPIAL4AQ9Y536 164 aa10.49□□□□□ -0.73
COPB1-208ENST00000532088 CELSR2Q9HCU4 2923 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 USF3Q68DE3 2245 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 CCDC160A6NGH7 325 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 OOEPA6NGQ2 149 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 TMEM14DPA8MWL7 114 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 VWC2LB2RUY7 222 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 H3BUI4 141 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 AKR7A2O43488 359 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ANGPTL7O43827 346 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 LY6HO94772 140 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 NXPH2O95156 264 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 PLATP00750 562 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 CSTBP04080 98 aaKnown RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 SFTPBP07988 381 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 CLEC2LP0C7M8 214 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 GTF2F2P13984 249 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ARSBP15848 533 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 SLC25A16P16260 332 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 BCL3P20749 454 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 TGFBR1P36897 503 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 MDH2P40926 338 aaKnown RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 GPR6P46095 362 aaPredicted RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 RORCP51449 518 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 QRFPP83859 136 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 MXD1Q05195 221 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 IL13RA2Q14627 380 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ZNF146Q15072 292 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 MICBQ29980 383 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ZNF404Q494X3 552 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 SPIN3Q5JUX0 258 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ATPAF1Q5TC12 328 aaPredicted RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 REC114Q7Z4M0 266 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 LRRC28Q86X40 367 aaPredicted RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 TGIF2LYQ8IUE0 185 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ZNF525Q8N782 197 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ACOT12Q8WYK0 555 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 AP3S1Q92572 193 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 FAM3DQ96BQ1 224 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 HMG20AQ9NP66 347 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 CCDC59Q9P031 241 aaKnown RBP10.48□□□□□ -0.73
COPB1-208ENST00000532088 NLKQ9UBE8 527 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 ING4Q9UNL4 249 aa10.48□□□□□ -0.73
COPB1-208ENST00000532088 WIPI2Q9Y4P8 454 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms