RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 A0A0A6YYH2 397 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 IGKV6-21A0A0C4DH24 114 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 RBFOX3A6NFN3 312 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 A6NJ64 397 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 UPK1AO00322 258 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 MPZL2O60487 215 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 PLIN3O60664 434 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 DHRS3O75911 302 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 MPZL1O95297 269 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 IGKV5-2P06315 115 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 CDK1P06493 297 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 OR4Q2P0C623 313 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 TSPOP30536 169 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 SLC18A1P54219 525 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 RHOAP61586 193 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 EXOC3L4Q17RC7 722 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 CLEC12AQ5QGZ9 265 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 NIPAL1Q6NVV3 410 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 LINC00337Q8N6G1 96 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 CIRBP-AS1Q8TBR5 109 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 FAM45AQ8TCE6 357 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 SRSF12Q8WXF0 261 aaKnown RBP2.81□□□□□ -1.96
USP47-211ENST00000531513 C22orf15Q8WYQ4 148 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 MRAP2Q96G30 205 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 FAM210AQ96ND0 272 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 APOL4Q9BPW4 351 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 DCUN1D5Q9BTE7 237 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 DRC3Q9H069 523 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 MFSD1Q9H3U5 465 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 RDH14Q9HBH5 336 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 SDHAF3Q9NRP4 125 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 TAS2R13Q9NYV9 303 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 MYO3BQ8WXR4 1341 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 TNS2Q63HR2 1409 aa2.81□□□□□ -1.96
USP47-211ENST00000531513 AHDC1Q5TGY3 1603 aaPredicted RBP2.8□□□□□ -1.96
USP47-211ENST00000531513 A0A0G2JMP0 313 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 A0A0X1KG70 313 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 A0A1W2PRG6 482 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 UPK2O00526 184 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 LIN7AO14910 233 aaPredicted RBP2.8□□□□□ -1.96
USP47-211ENST00000531513 SYNGR1O43759 233 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ADAP1O75689 374 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 IGLV3-25P01717 112 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ME2P23368 584 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 PSMB9P28065 219 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 CXCL12P48061 93 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 STC1P52823 247 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ATP6AP1LQ52LC2 224 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ACTBL2Q562R1 376 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 TEX30Q5JUR7 227 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 LAMTOR1Q6IAA8 161 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 FAM151BQ6UXP7 276 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 FAM183BPQ6ZVS7 135 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 DNAAF3Q8N9W5 541 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 LFNGQ8NES3 379 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ORAOV1Q8WV07 137 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ITFG2Q969R8 447 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 DDIT4LQ96D03 193 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 NEURL3Q96EH8 262 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 PGLYRP3Q96LB9 341 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 CDX2Q99626 313 aaPredicted RBP2.8□□□□□ -1.96
USP47-211ENST00000531513 MRPL20Q9BYC9 149 aaKnown RBP2.8□□□□□ -1.96
USP47-211ENST00000531513 PARP11Q9NR21 331 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 ZNF223Q9UK11 482 aaPredicted RBP2.8□□□□□ -1.96
USP47-211ENST00000531513 KLF13Q9Y2Y9 288 aaPredicted RBP2.8□□□□□ -1.96
USP47-211ENST00000531513 LRP4O75096 1905 aa2.8□□□□□ -1.96
USP47-211ENST00000531513 PTPRTO14522 1441 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 POLR3AO14802 1390 aaPredicted RBP2.79□□□□□ -1.96
USP47-211ENST00000531513 NRCAMQ92823 1304 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 LOC389332A0A1B0GUA5 103 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 A0A1B0GXF2 115 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 CENPBD1B2RD01 187 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 COCHO43405 550 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 SCO1O75880 301 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 ORM1P02763 201 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 NEFHP12036 1026 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 OPRK1P41145 380 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 LGALS7P47929 136 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 RPL14P50914 215 aaKnown RBP2.79□□□□□ -1.96
USP47-211ENST00000531513 RAB8AP61006 207 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 BNIP2Q12982 314 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 Q499Y3 187 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 CLLU1OSQ5K130 101 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 ZNF684Q5T5D7 378 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 PTRHD1Q6GMV3 140 aaKnown RBP2.79□□□□□ -1.96
USP47-211ENST00000531513 ZFP1Q6P2D0 407 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 Q6ZR03 302 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 C10orf107Q8IVU9 208 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 SAXO1Q8IYX7 474 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 SLC25A29Q8N8R3 303 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 SLC26A10Q8NG04 563 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 OR5T1Q8NG75 326 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 OR5M1Q8NGP8 315 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 FMC1Q96HJ9 113 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 ZNF649Q9BS31 505 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 SUCNR1Q9BXA5 334 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 TBL1XR1Q9BZK7 514 aa2.79□□□□□ -1.96
USP47-211ENST00000531513 DHX35Q9H5Z1 703 aaKnown RBP2.79□□□□□ -1.96
USP47-211ENST00000531513 ASB7Q9H672 318 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms