RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 PAPOLBQ9NRJ5 636 aaKnown RBP6.39□□□□□ -1.39
CD44-232ENST00000531118 CENPMQ9NSP4 180 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 RASL12Q9NYN1 266 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 DNAJC27Q9NZQ0 273 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 OR14J1Q9UGF5 321 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 HSPG2P98160 4391 aa6.39□□□□□ -1.39
CD44-232ENST00000531118 TMEM120BA0PK00 339 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 UNC119BA6NIH7 251 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 A8MZ25 164 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 ZNF732B4DXR9 585 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 ANGPT2O15123 496 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 IGHG2P01859 326 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 OR8U8P0C7N1 319 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 HSD11B1P28845 292 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 OMPP47874 163 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 MTNR1BP49286 362 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 ZNF121P58317 390 aaPredicted RBP6.38□□□□□ -1.39
CD44-232ENST00000531118 MAGOHP61326 146 aaKnown RBP6.38□□□□□ -1.39
CD44-232ENST00000531118 BDH1Q02338 343 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 FOXE3Q13461 319 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 FGD3Q5JSP0 725 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 TPTE2P1Q5T6R2 138 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 BAIAP2L2Q6UXY1 529 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 VTCN1Q7Z7D3 282 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 SGPP2Q8IWX5 399 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 BATF2Q8N1L9 274 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 RNF152Q8N8N0 203 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 PROKR2Q8NFJ6 384 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 OR11H1Q8NG94 326 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 OR6Q1Q8NGQ2 317 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 ST6GALNAC6Q969X2 333 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 EBF4Q9BQW3 602 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 RGCCQ9H4X1 137 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 ANKRD19PQ9H560 264 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 ZNF319Q9P2F9 582 aa6.38□□□□□ -1.39
CD44-232ENST00000531118 DHRS12A0PJE2 317 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 FAM172BPA6NC97 362 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 K7N7A8 449 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ARPC3O15145 178 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 FGF16O43320 207 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ZNF737O75373 536 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 MMP23AO75900 390 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ELANEP08246 267 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 CNTFRP26992 372 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 SLC6A6P31641 620 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 GABPB1Q06547 395 aaPredicted RBP6.37□□□□□ -1.39
CD44-232ENST00000531118 GPR50Q13585 617 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 EDDM3AQ14507 147 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 HAGHQ16775 308 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 PNLIPRP3Q17RR3 467 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 HLA-DRB5Q30154 266 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 CEP78Q5JTW2 689 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 PRAMEF5Q5TYX0 476 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ERICH5Q6P6B1 374 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 RRM2BQ7LG56 351 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 TIGD4Q8IY51 512 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 FAM71E2Q8N5Q1 922 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ZNF671Q8TAW3 534 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ZNF596Q8TC21 504 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 ZNRF4Q8WWF5 429 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 PGAM5Q96HS1 289 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 FAM110AQ9BQ89 295 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 NRIP2Q9BQI9 281 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 OR52D1Q9H346 318 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 TMBIM4Q9HC24 238 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 KRCC1Q9NPI7 259 aaPredicted RBP6.37□□□□□ -1.39
CD44-232ENST00000531118 KIAA1456Q9P272 454 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 LINC00312Q9Y6C7 94 aa6.37□□□□□ -1.39
CD44-232ENST00000531118 hADV38S2A0JD32 116 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A18PA6NE21 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A16PA6NEW6 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A20PA6NIJ5 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 OR5B21A6NL26 309 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A9PA6NNJ1 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A12PA8MX19 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A5PA8MXJ8 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 LEUTXA8MZ59 168 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM220BPB1ANY3 271 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 H3BSH0 61 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 J3QT63 122 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FXYD1O00168 92 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 AP4M1O00189 453 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 PSMD9O00233 223 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 OVOL1O14753 267 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 NXPH2O95156 264 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 IGLV1-47P01700 117 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A15PP0C7V4 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A13PP0C7W8 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A14PP0C7W9 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 FAM90A24PP0C7X0 464 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 TMEM11P17152 192 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 MNDAP41218 407 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 SLC15A1P46059 708 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 SELENOWP63302 87 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 MEF2CQ06413 473 aaPredicted RBP6.36□□□□□ -1.39
CD44-232ENST00000531118 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.36□□□□□ -1.39
CD44-232ENST00000531118 ZNF616Q08AN1 781 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 LSAMPQ13449 338 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 CCDC144NLQ6NUI1 221 aa6.36□□□□□ -1.39
CD44-232ENST00000531118 GDPD3Q7L5L3 318 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms