RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GRAMD2BQ96HH9 432 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 SLIRPQ9GZT3 109 aaKnown RBP7.52□□□□□ -1.21
CTNND1-227ENST00000530748 TCFL5Q9UL49 500 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 A0A1W2PN81 502 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 TRDCB7Z8K6 153 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 CHRNA7P36544 502 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 CEACAM3P40198 252 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
CTNND1-227ENST00000530748 PPP1R1AQ13522 171 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 ATP6V1FQ16864 119 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF574Q6ZN55 896 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-227ENST00000530748 C19orf35Q6ZS72 473 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 OR6C3Q9NZP0 311 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 ICAM5Q9UMF0 924 aa7.52□□□□□ -1.21
CTNND1-227ENST00000530748 RGPD3A6NKT7 1758 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-227ENST00000530748 IGHV3-43A0A0B4J1X8 118 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MPZL1O95297 269 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 KRASP01116 189 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 IGHV3-43DP0DP04 118 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 ZBTB37Q5TC79 503 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF425Q6IV72 752 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 DGAT2L6Q6ZPD8 337 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 LINC00596Q86U02 117 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 CCL17Q92583 94 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MAP6Q96JE9 813 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 GPR137Q96N19 417 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 CITO14578 2027 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 IGHV5-10-1A0A0J9YXX1 117 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 CST7O76096 145 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 ZFPL1O95159 310 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 CD3EP07766 207 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 FAM3AP98173 230 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 SP6Q3SY56 376 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 TMEM65Q6PI78 240 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 RNF2Q99496 336 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 H3BP45 60 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 HAX1O00165 279 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 OR2J3O76001 311 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 RAC3P60763 192 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 GGNBP1Q5YKI7 109 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 TRAV38-1A0A0B4J264 116 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 PNPP00491 289 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MAGEA5P43359 124 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 GZMKP49863 264 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 LSM6P62312 80 aaKnown RBP7.51□□□□□ -1.21
CTNND1-227ENST00000530748 GUK1Q16774 197 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 FA2HQ7L5A8 372 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 OR2Y1Q8NGV0 311 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MRGPRDQ8TDS7 321 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 DPF1Q92782 380 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MOGAT1Q96PD6 335 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 SEBOXQ9HB31 216 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MRM2Q9UI43 246 aaKnown RBP7.51□□□□□ -1.21
CTNND1-227ENST00000530748 RBBP6Q7Z6E9 1792 aaKnown RBP7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MS4A18H0YCH9 400 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 AGFG2O95081 481 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 IGHA1P01876 353 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 PNLIPP16233 465 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 TIAL1Q01085 375 aaKnown RBP eCLIP7.51□□□□□ -1.215e-7■■■■■ 26.8
CTNND1-227ENST00000530748 MS4A18Q3C1V0 323 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 CLLU1Q5K131 121 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 MUC20Q8N307 709 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-227ENST00000530748 ADTRPQ96IZ2 230 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 DUSP15Q9H1R2 295 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-227ENST00000530748 NIT2Q9NQR4 276 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 RASL12Q9NYN1 266 aa7.51□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF737O75373 536 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 HAND1O96004 215 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 MBPP02686 304 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-227ENST00000530748 INHBBP09529 407 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 OR5AC1P0C628 307 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 GNG4P50150 75 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 RAG2P55895 527 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
CTNND1-227ENST00000530748 RPS4Y2Q8TD47 263 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 FAM60AQ9NP50 221 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 ATAD5Q96QE3 1844 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 A0A1W2PPQ1 181 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 OGG1O15527 345 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 BGLAPP02818 100 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 CTLA4P16410 223 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 SRSF5Q13243 272 aaKnown RBP7.5□□□□□ -1.21
CTNND1-227ENST00000530748 VSTM2LQ96N03 204 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 RASL10BQ96S79 203 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 SMOC1Q9H4F8 434 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 PLAC1Q9HBJ0 212 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 CYB5R1Q9UHQ9 305 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 A0A1B0GTH9 108 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 CTSDP07339 412 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-227ENST00000530748 COX7A1P24310 79 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 FCER1GP30273 86 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 TIPARPQ7Z3E1 657 aaKnown RBP7.5□□□□□ -1.21
CTNND1-227ENST00000530748 TBC1D26Q86UD7 250 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 OR2M7Q8NG81 312 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 PLSCR3Q9NRY6 295 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 A0A1B0GTQ1 180 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 TMEM210A6NLX4 147 aa7.5□□□□□ -1.21
CTNND1-227ENST00000530748 PRSS44E7EML9 344 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms