RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 MAGEA5P43359 124 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 MIDNQ504T8 468 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 TFAP2EQ6VUC0 442 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF519Q8TB69 540 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 MITD1Q8WV92 249 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
SCN3B-206ENST00000530277 FRZBQ92765 325 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 SOSTQ9BQB4 213 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 GLS2Q9UI32 602 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
SCN3B-206ENST00000530277 TRBV5-7A0A0A0MS05 114 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF816-ZNF321PA0A0X1KG74 233 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 NFYBP25208 207 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 TMEM33P57088 247 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 DRAM2Q6UX65 266 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 THNSL2Q86YJ6 484 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 SLC30A7Q8NEW0 376 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 TRIB1Q96RU8 372 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 SPSB2Q99619 263 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 HEATR1Q9H583 2144 aaKnown RBP10.84□□□□□ -0.67
SCN3B-206ENST00000530277 WASF3Q9UPY6 502 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
SCN3B-206ENST00000530277 FAM74A7A6NL05 159 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 SFT2D2O95562 160 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 KRASP01116 189 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 HPNP05981 417 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 CTRB1P17538 263 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 MPLP40238 635 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 SLC10A1Q14973 349 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 FAM74A3Q4VXF1 159 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 CTRB2Q6GPI1 263 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 WDR5BQ86VZ2 330 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 NECAP1Q8NC96 275 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 OR2Y1Q8NGV0 311 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 HGDQ93099 445 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 RBMXL1Q96E39 390 aaKnown RBP10.84□□□□□ -0.67
SCN3B-206ENST00000530277 PRRX2Q99811 253 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 G6PC2Q9NQR9 355 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 AK3Q9UIJ7 227 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
SCN3B-206ENST00000530277 UMAD1C9J7I0 102 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 RAC1P63000 192 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 CST9LP1Q5W188 147 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 OR2A2Q6IF42 318 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 LINC00114Q6XXX2 140 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 ARHGEF39Q8N4T4 335 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 GDF15Q99988 308 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 C12orf10Q9HB07 376 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 GCM1Q9NP62 436 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 ERRFI1Q9UJM3 462 aaPredicted RBP10.84□□□□□ -0.67
SCN3B-206ENST00000530277 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCN3B-206ENST00000530277 AQP8O94778 261 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 PMP22Q01453 160 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 UNC119Q13432 240 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 BVESQ8NE79 360 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 TCFL5Q9UL49 500 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 HS3ST3B1Q9Y662 390 aa10.84□□□□□ -0.67
SCN3B-206ENST00000530277 ZNF98A6NK75 572 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 SERPINE3A8MV23 424 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 TRAF3IP2O43734 574 aaPredicted RBP10.83□□□□□ -0.68
SCN3B-206ENST00000530277 LY86O95711 162 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ARG1P05089 322 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 CD37P11049 281 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 THBS4P35443 961 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 IGLV3-21P80748 117 aaPredicted RBP10.83□□□□□ -0.68
SCN3B-206ENST00000530277 GUCA2BQ16661 112 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 IZUMO4Q1ZYL8 232 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 COL13A1Q5TAT6 717 aaPredicted RBP10.83□□□□□ -0.68
SCN3B-206ENST00000530277 KIRREL1Q96J84 757 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 SLC17A5Q9NRA2 495 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 TREM2Q9NZC2 230 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ZP3P21754 424 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ROM1Q03395 351 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ZNF260Q3ZCT1 412 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ATP1A1-AS1Q5TC04 95 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 SLC25A42Q86VD7 318 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 DMBX1Q8NFW5 382 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 IFT22Q9H7X7 185 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 GFOD1Q9NXC2 390 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 PIPOXQ9P0Z9 390 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ZNF319Q9P2F9 582 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 IGHV3-43A0A0B4J1X8 118 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 OR6C65A6NJZ3 312 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 AQP7P3A6NL99 342 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 HMSDA8MTL9 139 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 IGHV3-43DP0DP04 118 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 FPR2P25090 351 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 TAGLN2P37802 199 aaKnown RBP10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ZNF816Q0VGE8 651 aaPredicted RBP10.83□□□□□ -0.68
SCN3B-206ENST00000530277 UBE2V2Q15819 145 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ZDHHC22Q8N966 263 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 LRRC75AQ8NAA5 344 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 LHFPL5Q8TAF8 219 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 CT55Q8WUE5 264 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 ANXA10Q9UJ72 324 aa10.83□□□□□ -0.68
SCN3B-206ENST00000530277 C5orf63A6NC05 138 aa10.82□□□□□ -0.68
SCN3B-206ENST00000530277 LINC00862A6NCI5 91 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms