RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 DCTN5Q9BTE1 182 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 DUSP21Q9H596 190 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 CNTD2Q9H8S5 307 aa10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 RRP15Q9Y3B9 282 aaKnown RBP10.48□□□□□ -0.73
CCDC90B-216ENST00000529856 TRBV5-5A0A0J9YX44 114 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF879B4DU55 563 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 SPRY1O43609 319 aaPredicted RBP10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 INMTO95050 263 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 CYB5AP00167 134 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 CD1AP06126 327 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 RAB3AP20336 220 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 CRHBPP24387 322 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 NPBWR2P48146 333 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 RPS11P62280 158 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 ACSM1Q08AH1 577 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 IRF3Q14653 427 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 KISS1Q15726 138 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 YIF1BQ5BJH7 314 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 Q8IYB0 196 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF561Q8N587 486 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 C8orf46Q8TAG6 207 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 TMEM106AQ96A25 262 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 RFT1Q96AA3 541 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 CNBD2Q96M20 576 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 MND1Q9BWT6 205 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 NUP50Q9UKX7 468 aa10.47□□□□□ -0.73
CCDC90B-216ENST00000529856 IGKV1-12A0A0C4DH73 117 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 TOX4O94842 621 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 IGKV1D-12P01611 117 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 HCKP08631 526 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 MMP9P14780 707 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 NDUFB7P17568 137 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 CELP19835 753 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 BCL3P20749 454 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 CEBPDP49716 269 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 ZP1P60852 638 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 ARF6P62330 175 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 BDH1Q02338 343 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 Q499Y3 187 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 SAXO1Q8IYX7 474 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 ZSCAN4Q8NAM6 433 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 TMEM185AQ8NFB2 350 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 OR13C5Q8NGS8 318 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 H1FXQ92522 213 aaKnown RBP10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 WDFY2Q96P53 400 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 SIRPDQ9H106 197 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 SEBOXQ9HB31 216 aaPredicted RBP10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 TAS2R4Q9NYW5 299 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 ZNF69Q9UC07 566 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 OR14J1Q9UGF5 321 aa10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 LSM2Q9Y333 95 aaKnown RBP10.46□□□□□ -0.73
CCDC90B-216ENST00000529856 FBN1P35555 2871 aaKnown RBP10.46□□□□□ -0.74
CCDC90B-216ENST00000529856 PNMA8CA0A1B0GUJ8 204 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 MAGEB3O15480 346 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 RGS10O43665 173 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 TCF21O43680 179 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 ANGPTL7O43827 346 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 GPX5O75715 221 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 KDM4BO94953 1096 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 ALDOBP05062 364 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 SFTPBP07988 381 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 CHRM2P08172 466 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 IGHV4-38-2P0DP08 117 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 TMEM225BP0DP42 221 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 IGFBP3P17936 291 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 FPR2P25090 351 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 CAPZA1P52907 286 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 ZNF146Q15072 292 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 SPHARQ15513 63 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 RBM48Q5RL73 367 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 METTL11BQ5VVY1 283 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 FAM58AQ8N1B3 248 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 OR51A2Q8NGJ7 313 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 OR5D18Q8NGL1 313 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 EMG1Q92979 244 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 OR5M11Q96RB7 305 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 TBX15Q96SF7 602 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 ZNF184Q99676 751 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 PCGF1Q9BSM1 259 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 FAM234AQ9H0X4 552 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 ELL3Q9HB65 397 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 RHOFQ9HBH0 211 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 TMEM138Q9NPI0 162 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 RBFOX1Q9NWB1 397 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 KPTNQ9Y664 436 aa10.45□□□□□ -0.74
CCDC90B-216ENST00000529856 IGHV3OR16-10A0A075B7F0 116 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 TRBV5-7A0A0A0MS05 114 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 A0A0A6YYJ9 748 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 K7N7A8 449 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 TK1P04183 234 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 COL10A1Q03692 680 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 PDCD1Q15116 288 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 MED22Q15528 200 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 C1orf122Q6ZSJ8 110 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 USP43Q70EL4 1123 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 PRSS48Q7RTY5 328 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 SATL1Q86VE3 508 aa10.44□□□□□ -0.74
CCDC90B-216ENST00000529856 BCL6BQ8N143 479 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms