RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 ALKBH4Q9NXW9 302 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 PISDQ9UG56 409 aa12.43□□□□□ -0.42
USP48-213ENST00000529637 TAGLN2P37802 199 aaKnown RBP12.42□□□□□ -0.42
USP48-213ENST00000529637 RAB1AP62820 205 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 C1QL2Q7Z5L3 287 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 OR5AS1Q8N127 324 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.42□□□□□ -0.42
USP48-213ENST00000529637 RARRES3Q9UL19 164 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 ARGFXA6NJG6 315 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 FIGNL2A6NMB9 653 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 CDRT15L2A8MXV6 281 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 RER1O15258 196 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 CYB5BO43169 146 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 EFNA2O43921 213 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 IGHG1P01857 330 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
USP48-213ENST00000529637 SNRPCP09234 159 aaKnown RBP12.42□□□□□ -0.42
USP48-213ENST00000529637 SEC11BP0C7V7 166 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 ZNF43P17038 809 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 CHATP28329 748 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 CASP6P55212 293 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 OR5L2Q8NGL0 311 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 OR10S1Q8NGN2 331 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
USP48-213ENST00000529637 CHRM2P08172 466 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
USP48-213ENST00000529637 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 FAM57BQ71RH2 274 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 ABHD5Q8WTS1 349 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 NELFAQ9H3P2 528 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 GPR84Q9NQS5 396 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 C1orf123Q9NWV4 160 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 QDPRP09417 244 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 UBE2V2Q15819 145 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 SSX2Q16385 188 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 TSPO2Q5TGU0 170 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 COMMD1Q8N668 190 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 SSX3Q99909 188 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 ZNF319Q9P2F9 582 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 KLHL13Q9P2N7 655 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 TUBD1Q9UJT1 453 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 FAM186AA6NE01 2351 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 CPAMD8Q8IZJ3 1885 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 G3V3Y1 287 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 PPP1R2P9O14990 202 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 ZFAND5O76080 213 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 ZNF121P58317 390 aaPredicted RBP12.41□□□□□ -0.42
USP48-213ENST00000529637 ZP4Q12836 540 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 TGIF2LXQ8IUE1 241 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 CPNE4Q96A23 557 aaPredicted RBP12.41□□□□□ -0.42
USP48-213ENST00000529637 S100A13Q99584 98 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 GINS3Q9BRX5 216 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 HDHD3Q9BSH5 251 aaPredicted RBP12.41□□□□□ -0.42
USP48-213ENST00000529637 LIME1Q9H400 295 aa12.41□□□□□ -0.42
USP48-213ENST00000529637 AKIRIN1Q9H9L7 192 aaPredicted RBP12.41□□□□□ -0.42
USP48-213ENST00000529637 GABREP78334 506 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 WDR74Q6RFH5 385 aaPredicted RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 STX12Q86Y82 276 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 KMT5CQ86Y97 462 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 TDHQ8IZJ6 230 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 CARFQ8N187 725 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 EMG1Q92979 244 aaKnown RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 SCGB3A2Q96PL1 93 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 ZNF701Q9NV72 531 aaPredicted RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 DHRS7CA6NNS2 312 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 ZNF878C9JN71 531 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 ADAM10O14672 748 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 P2RY1P47900 373 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 DLK1P80370 383 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 OR2T2Q6IF00 324 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 CPEB2Q7Z5Q1 589 aaKnown RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 NFAM1Q8NET5 270 aaPredicted RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 OR10AD1Q8NGE0 317 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 RHBDD1Q8TEB9 315 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 FRZBQ92765 325 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 POM121Q96HA1 1249 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 ZNF2Q9BSG1 426 aaPredicted RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 MYOTQ9UBF9 498 aa12.4□□□□□ -0.42
USP48-213ENST00000529637 C14orf166Q9Y224 244 aaKnown RBP12.4□□□□□ -0.42
USP48-213ENST00000529637 OR5H15A6NDH6 313 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 OR5H1A6NKK0 313 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 ZNF724A8MTY0 619 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 ZNF587BE7ETH6 402 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 F5H5K5 113 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 ZNF17P17021 662 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
USP48-213ENST00000529637 PKIAP61925 76 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 PLPPR5Q32ZL2 321 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 LYZL2Q7Z4W2 148 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 RABEPKQ7Z6M1 372 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 MRGPRX4Q96LA9 322 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 UBE2ZQ9H832 354 aaPredicted RBP12.39□□□□□ -0.43
USP48-213ENST00000529637 CRLF2Q9HC73 371 aa12.39□□□□□ -0.43
USP48-213ENST00000529637 B3GAT1Q9P2W7 334 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms