RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SFTPBP07988 381 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 NPBWR2P48146 333 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 SOX2P48431 317 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 ARMCX4Q5H9R4 360 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 MKXQ8IYA7 352 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 OR51A2Q8NGJ7 313 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 MYDGFQ969H8 173 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 TBX15Q96SF7 602 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 SEBOXQ9HB31 216 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 ZNF69Q9UC07 566 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 ERGIC3Q9Y282 383 aa13.3□□□□□ -0.28
TSPAN4-218ENST00000529566 SPRY1O43609 319 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 INMTO95050 263 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 CD1AP06126 327 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 BCL3P20749 454 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 CRHBPP24387 322 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 VHLP40337 213 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 POU3F4P49335 361 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 TAS2R43P59537 309 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 ZP1P60852 638 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 ARF6P62330 175 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 ACSM1Q08AH1 577 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 SCGB2A2Q13296 93 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 KISS1Q15726 138 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 BCL6BQ8N143 479 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 ZNF561Q8N587 486 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 TMEM106AQ96A25 262 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 RFT1Q96AA3 541 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 WDFY2Q96P53 400 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 ELL3Q9HB65 397 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 RBFOX1Q9NWB1 397 aaKnown RBP13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 TAS2R4Q9NYW5 299 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 IL36RNQ9UBH0 155 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 RAB26Q9ULW5 256 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 DNHD1Q96M86 4753 aa13.29□□□□□ -0.28
TSPAN4-218ENST00000529566 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 MYL12BO14950 172 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 TCF21O43680 179 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 ANGPTL7O43827 346 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 ZNF737O75373 536 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 TOX4O94842 621 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 KDM4BO94953 1096 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 VENTXO95231 258 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 OCM2P0CE71 109 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 NDUFB7P17568 137 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 RAB3AP20336 220 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 BDH1Q02338 343 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 YIF1BQ5BJH7 314 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 USP43Q70EL4 1123 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 Q8IYB0 196 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 SAXO1Q8IYX7 474 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 TMEM185AQ8NFB2 350 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 C22orf15Q8WYQ4 148 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 ORAI1Q96D31 301 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 OR5M11Q96RB7 305 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 OCEL1Q9H607 264 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 OR14J1Q9UGF5 321 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 TPRKBQ9Y3C4 175 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 SOX21Q9Y651 276 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 KPTNQ9Y664 436 aa13.28□□□□□ -0.28
TSPAN4-218ENST00000529566 TRBV5-7A0A0A0MS05 114 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 A0A0A6YYJ9 748 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 K7N7A8 449 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 GPX5O75715 221 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 CD2P06729 351 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 IGFBP3P17936 291 aaPredicted RBP13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 CELP19835 753 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 COL10A1Q03692 680 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 ZNF146Q15072 292 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 KRTAP24-1Q3LI83 254 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 Q499Y3 187 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 FAM58AQ8N1B3 248 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 KIR3DL3Q8N743 410 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 Q8N7P7 452 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 ZSCAN4Q8NAM6 433 aaPredicted RBP13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 OR52N4Q8NGI2 321 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 OR5D18Q8NGL1 313 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 CNBD2Q96M20 576 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 PCGF1Q9BSM1 259 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 MND1Q9BWT6 205 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 HMG20AQ9NP66 347 aa13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 RRP15Q9Y3B9 282 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-218ENST00000529566 TRBV23-1A0A0A0MS06 115 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 TRAV40A0A0B4J280 105 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 CENPVL3A0A0U1RRI6 287 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 PNMA8CA0A1B0GUJ8 204 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 RGS9O75916 674 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 TK1P04183 234 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 ALDOBP05062 364 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 CHRM2P08172 466 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 HCKP08631 526 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 OCMP0CE72 109 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 CALCBP10092 127 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 FPR2P25090 351 aa13.26□□□□□ -0.29
TSPAN4-218ENST00000529566 HILS1P60008 231 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms