RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CEACAM21Q3KPI0 293 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 DMRTC1Q5HYR2 192 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 ZBTB37Q5TC79 503 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 TTC23Q5W5X9 447 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 TMEM42Q69YG0 159 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 KCTD8Q6ZWB6 473 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 NLRC3Q7RTR2 1065 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 ZDHHC23Q8IYP9 409 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 SIGLECL1Q8N7X8 197 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 SCCPDHQ8NBX0 429 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 OR10H4Q8NGA5 316 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 OR5A2Q8NGI9 324 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 OR10Z1Q8NGY1 313 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 ANGPTL6Q8NI99 470 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 FAM110DQ8TAY7 271 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 RORBQ92753 470 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 RPL3LQ92901 407 aaKnown RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 RFKQ969G6 155 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 FAM71F1Q96KD3 344 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 NUDT16L1Q9BRJ7 211 aaKnown RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 RTL8AQ9BWD3 113 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 OR51I2Q9H344 312 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 MOB1AQ9H8S9 216 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 ABCB9Q9NP78 766 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 TRIM36Q9NQ86 728 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 DIABLOQ9NR28 239 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 PAK1IP1Q9NWT1 392 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 SMPD3Q9NY59 655 aaPredicted RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 ERVK-18Q9QC07 812 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 KAAG1Q9UBP8 84 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 PIGLQ9Y2B2 252 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 EXOGQ9Y2C4 368 aaKnown RBP6.98□□□□□ -1.29
SSBP3-212ENST00000528930 GMPPBQ9Y5P6 360 aa6.98□□□□□ -1.29
SSBP3-212ENST00000528930 LOC100130705A0A1B0GUX0 176 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 A0A1B0GW55 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 ZNF732B4DXR9 585 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 P2RY10O00398 339 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 SLC16A6O15403 523 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 RHBDL1O75783 438 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 KRT8P05787 483 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L2P0CJ85 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L3P0CJ86 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L4P0CJ87 422 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L5P0CJ88 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L6P0CJ89 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L7P0CJ90 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 PPIAL4GP0DN37 164 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 MUC1P15941 1255 aaPredicted RBP6.97□□□□□ -1.29
SSBP3-212ENST00000528930 FAHP16930 419 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 MTNR1AP48039 350 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 GPM6AP51674 278 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 CDONQ4KMG0 1287 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 WDR38Q5JTN6 314 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 CEP78Q5JTW2 689 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 BCL2L15Q5TBC7 163 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 ATPAF1Q5TC12 328 aaPredicted RBP6.97□□□□□ -1.29
SSBP3-212ENST00000528930 GPR107Q5VW38 600 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 MEDAGQ5VYS4 303 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4L9Q6RFH8 374 aaPredicted RBP6.97□□□□□ -1.29
SSBP3-212ENST00000528930 MOB3CQ70IA8 216 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 THAP5Q7Z6K1 395 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 ENTHD1Q8IYW4 607 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 CADM3Q8N126 398 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 PRSS35Q8N3Z0 413 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 FGFRL1Q8N441 504 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 KIR3DL3Q8N743 410 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 YIPF7Q8N8F6 280 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 RHOXF1Q8NHV9 184 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 C22orf15Q8WYQ4 148 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 UPRTQ96BW1 309 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 LGALS12Q96DT0 336 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 RNFT2Q96EX2 444 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 MED30Q96HR3 178 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 HIST1H2AAQ96QV6 131 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 CCL13Q99616 98 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 MRI1Q9BV20 369 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 WDR13Q9H1Z4 485 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 FAM118AQ9NWS6 357 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 IMPAD1Q9NX62 359 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 DUX4Q9UBX2 424 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 ENPP5Q9UJA9 477 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 NUP50Q9UKX7 468 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 GTF2A1LQ9UNN4 478 aa6.97□□□□□ -1.29
SSBP3-212ENST00000528930 A6NIN4 97 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 OR5B21A6NL26 309 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 DHRS7CA6NNS2 312 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 DVL1O14640 695 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 AKR7A2O43488 359 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 MTRF1O75570 445 aaKnown RBP6.96□□□□□ -1.3
SSBP3-212ENST00000528930 NRASP01111 189 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 CCDC159P0C7I6 412 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 TRAPPC2P0DI81 140 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 TRAPPC2BP0DI82 140 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 IGHV4-38-2P0DP08 117 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 OMGP23515 440 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 FPR2P25090 351 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ATP6V1E1P36543 226 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 KIR3DL2P43630 455 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 TGM4P49221 684 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms