RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 KPNA3O00505 521 aaPredicted RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 SRP72O76094 671 aaKnown RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 CD74P04233 296 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 IFNA16P05015 189 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 BCHEP06276 602 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SLC2A1P11166 492 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 PVRP15151 417 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 ZNF17P17021 662 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 HTR1DP28221 377 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 NTSP30990 170 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 CD52P31358 61 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SLCO1A2P46721 670 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 EFNA3P52797 238 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 AP2S1P53680 142 aaPredicted RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 AQP5P55064 265 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 ERVPABLB-1P60509 514 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 FAM3AP98173 230 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 AQP6Q13520 282 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SLC10A1Q14973 349 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SLC9A3R2Q15599 337 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 MS4A13Q5J8X5 152 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 RWDD4Q6NW29 188 aaKnown RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 GDPD3Q7L5L3 318 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 DEFB128Q7Z7B8 93 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 ZBTB8OSQ8IWT0 167 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 PRSS58Q8IYP2 241 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 TMEM161BQ8NDZ6 487 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 OR5AR1Q8NGP9 310 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 OR2G2Q8NGZ5 317 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 OR56B4Q8NH76 319 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 NDRG1Q92597 394 aaKnown RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 DNAJC19Q96DA6 116 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 COL21A1Q96P44 957 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 CGREF1Q99674 301 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 GPR21Q99679 349 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 GPR22Q99680 433 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 NXF2Q9GZY0 626 aaKnown RBP4.28□□□□□ -1.72
PCF11-202ENST00000528336 OR51J1Q9H342 316 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 GIN1Q9NXP7 522 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 RIMS3Q9UJD0 308 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 GNPTGQ9UJJ9 305 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 LTBP2Q14767 1821 aa4.28□□□□□ -1.72
PCF11-202ENST00000528336 LAMA3Q16787 3333 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 TANC1Q9C0D5 1861 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 IGHV3OR16-12A0A075B7B8 117 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 A0A1B0GWB2 263 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ANKRD63C9JTQ0 380 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 CCRL2O00421 344 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 CD55P08174 381 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 OR8U9P0C7N5 309 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 CCDC166P0CW27 439 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 DNAH10OSP0CZ25 163 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 UCHL3P15374 230 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 HTR1FP30939 366 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 HRH1P35367 487 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 OMPP47874 163 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 RAB8AP61006 207 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 PSME3P61289 254 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 SLC25A11Q02978 314 aaKnown RBP4.27□□□□□ -1.73
PCF11-202ENST00000528336 ACVR1Q04771 509 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 BCL2L1Q07817 233 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 SHHQ15465 462 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ZNF726P1Q15940 193 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 TTLL9Q3SXZ7 439 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ZBED5Q49AG3 693 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 SPIN4Q56A73 249 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 FHL5Q5TD97 284 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 HACD4Q5VWC8 232 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 C3orf33Q6P1S2 294 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ZNF557Q8N988 423 aaPredicted RBP4.27□□□□□ -1.73
PCF11-202ENST00000528336 OR8U1Q8NH10 309 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ACTRT1Q8TDG2 376 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 DYDC1Q8WWB3 177 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 CMTM7Q96FZ5 175 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 KCTD7Q96MP8 289 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 OR5B12Q96R08 314 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 MRPL45Q9BRJ2 306 aaKnown RBP4.27□□□□□ -1.73
PCF11-202ENST00000528336 CDCA4Q9BXL8 241 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ULBP1Q9BZM6 244 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 OR51B5Q9H339 312 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 PRORYQ9H606 182 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 TMEM27Q9HBJ8 222 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 FBXO6Q9NRD1 293 aaPredicted RBP4.27□□□□□ -1.73
PCF11-202ENST00000528336 INIPQ9NRY2 104 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 RGS18Q9NS28 235 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.27□□□□□ -1.73
PCF11-202ENST00000528336 GID8Q9NWU2 228 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 RAB26Q9ULW5 256 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 ERGIC3Q9Y282 383 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 GOLT1BQ9Y3E0 138 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 KLF12Q9Y4X4 402 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 LOXHD1Q8IVV2 1947 aa4.27□□□□□ -1.73
PCF11-202ENST00000528336 TRIOBPQ9H2D6 2365 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 GJE1A6NN92 205 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 KLLNB2CW77 178 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 F5H5T6 163 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms