RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 GAS8-AS1O95177 125 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 DUS4LO95620 317 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PMS2P2O95744 297 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OPN1SWP03999 348 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 CTSDP07339 412 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF705DP0CH99 300 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF705BP0CI00 300 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PGA4P0DJD7 388 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PGA5P0DJD9 388 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR12D1P0DN82 309 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 EPCAMP16422 314 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 FUT1P19526 365 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 GABRA3P34903 492 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 FAUP35544 74 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 CHI3L1P36222 383 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 LPAR6P43657 344 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 GABRA2P47869 451 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 UCP3P55916 312 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PIGPP57054 158 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR12D2P58182 307 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PLP1P60201 277 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 UBE2NP61088 152 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 UFM1P61960 85 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RPL7AP62424 266 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RPL32P62910 135 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 CRADDP78560 199 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZXDBP98169 803 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RUNX1Q01196 453 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 HMGCS1Q01581 520 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TLE3Q04726 772 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZFP36L1Q07352 338 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 MMDQ15546 238 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RAB30Q15771 203 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 LTC4SQ16873 150 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ACOT6Q3I5F7 207 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 CEACAM21Q3KPI0 293 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ALKBH6Q3KRA9 238 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 LINC00303Q3SY05 128 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TDRG1Q3Y452 100 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM176BQ3YBM2 270 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PDLIM3Q53GG5 364 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RNASE12Q5GAN4 147 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 GCSAMLQ5JQS6 135 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF678Q5SXM1 525 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 C12orf73Q69YU5 71 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RTL6Q6ICC9 239 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 UNQ5815/PRO19632Q6UWF5 114 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 FRRS1Q6ZNA5 592 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 COX15Q7KZN9 410 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 COMMD6Q7Z4G1 85 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 SCD5Q86SK9 330 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TMPRSS11BQ86T26 416 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 GKN2Q86XP6 184 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 FAM90A1Q86YD7 464 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TGIF2LYQ8IUE0 185 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 IZUMO1Q8IYV9 350 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RNF175Q8N4F7 328 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZBTB34Q8NCN2 500 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ACVR1CQ8NER5 493 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 LFNGQ8NES3 379 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR10G2Q8NGC3 310 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR52I1Q8NGK6 324 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR6N1Q8NGY5 312 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR4X1Q8NH49 305 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR52I2Q8NH67 350 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OSR1Q8TAX0 266 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 GPR119Q8TDV5 335 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TNFAIP8L1Q8WVP5 186 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TMED6Q8WW62 240 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 GEMIN6Q8WXD5 167 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PTH2Q96A98 100 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 APH1AQ96BI3 265 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 MOAP1Q96BY2 351 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 KTI12Q96EK9 354 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 SNX22Q96L94 193 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TSSK3Q96PN8 268 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 FEVQ99581 238 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC25A21Q9BQT8 299 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 PYGO2Q9BRQ0 406 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 VAMP8Q9BV40 100 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 NUDT9Q9BW91 350 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 OR52D1Q9H346 318 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 TCEAL2Q9H3H9 227 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ALG9Q9H6U8 611 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 UBE2ZQ9H832 354 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 MOB1AQ9H8S9 216 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 LRTM1Q9HBL6 345 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 INPP5EQ9NRR6 644 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC7A10Q9NS82 523 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF586Q9NXT0 402 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 MRM2Q9UI43 246 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 CCNL1Q9UK58 526 aaPredicted RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 MMP17Q9ULZ9 603 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 HHLA2Q9UM44 414 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 SIGLEC7Q9Y286 467 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 AK6Q9Y3D8 172 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 STRAPQ9Y3F4 350 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 WIPI2Q9Y4P8 454 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms