RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TMEM100Q9NV29 134 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 C1orf123Q9NWV4 160 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 SHANK1Q9Y566 2161 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 FAM221AA4D161 298 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 ZNHIT1O43257 154 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 FARS2O95363 451 aaKnown RBP15.19■□□□□ 0.02
USH1C-205ENST00000527020 CD59P13987 128 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 PDCD1Q15116 288 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 PLEKHN1Q494U1 663 aaPredicted RBP15.19■□□□□ 0.02
USH1C-205ENST00000527020 BCO1Q9HAY6 547 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 NECAP2Q9NVZ3 263 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 GSKIPQ9P0R6 139 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 SLC7A11Q9UPY5 501 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 ST3GAL6Q9Y274 331 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 ARHGAP21Q5T5U3 1957 aa15.19■□□□□ 0.02
USH1C-205ENST00000527020 ARID1AO14497 2285 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 RBMXP38159 391 aaKnown RBP15.18■□□□□ 0.02
USH1C-205ENST00000527020 STK11Q15831 433 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 ABHD17BQ5VST6 288 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 C9orf135Q5VTT2 229 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 TUSC5Q8IXB3 177 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 BOLLQ8N9W6 283 aaKnown RBP15.18■□□□□ 0.02
USH1C-205ENST00000527020 ADAMTS17Q8TE56 1095 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 GPR87Q9BY21 358 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 SLC5A7Q9GZV3 580 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 SLC6A15Q9H2J7 730 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 PLA2G3Q9NZ20 509 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 NCOR1O75376 2440 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 ZNF503-AS2A6NEH8 195 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 ZNF850A8MQ14 1090 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 FAM166BA8MTA8 275 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 SP9P0CG40 484 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 ZNF708P17019 499 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 MAGEA5P43359 124 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 RBM11P57052 281 aaKnown RBP15.18■□□□□ 0.02
USH1C-205ENST00000527020 TAGLNQ01995 201 aaKnown RBP15.18■□□□□ 0.02
USH1C-205ENST00000527020 SPEM2Q0P670 501 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 OR1C1Q15619 314 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 SGPP2Q8IWX5 399 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 TMED6Q8WW62 240 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 TTTY12Q9BZ98 90 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 ASF1BQ9NVP2 202 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 CRIM1Q9NZV1 1036 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 DNAJB11Q9UBS4 358 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 GLS2Q9UI32 602 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 ATPIF1Q9UII2 106 aa15.18■□□□□ 0.02
USH1C-205ENST00000527020 TNRC6AQ8NDV7 1962 aaKnown RBP15.18■□□□□ 0.02
USH1C-205ENST00000527020 A0A096LPE4 126 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 A0A1W2PPZ6 126 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 CD79AP11912 226 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 S100A10P60903 97 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 DCAF10Q5QP82 559 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 TMEM200AQ86VY9 491 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 MRPL24Q96A35 216 aaKnown RBP15.17■□□□□ 0.02
USH1C-205ENST00000527020 TECTBQ96PL2 329 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 FGF23Q9GZV9 251 aaPredicted RBP15.17■□□□□ 0.02
USH1C-205ENST00000527020 LDAHQ9H6V9 325 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 RPL36A-HNRNPH2H7BZ11 118 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 BET1O15155 118 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 PDCD6O75340 191 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 APOC3P02656 99 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 FAM157CP0CG43 387 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 NPBWR2P48146 333 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 PIGPP57054 158 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 IAH1Q2TAA2 248 aaPredicted RBP15.17■□□□□ 0.02
USH1C-205ENST00000527020 ZNF585AQ6P3V2 769 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 ZNF611Q8N823 705 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 MARC2Q969Z3 335 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 CNTNAP3BQ96NU0 1288 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 CNTNAP3Q9BZ76 1288 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 PIGMQ9H3S5 423 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 CALHM2Q9HA72 323 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 B4GALT7Q9UBV7 327 aa15.17■□□□□ 0.02
USH1C-205ENST00000527020 C21orf140B9A014 251 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 HLA-HP01893 362 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 PET100P0DJ07 73 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 CCL2P13500 99 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 AIMP2Q13155 320 aaKnown RBP15.16■□□□□ 0.02
USH1C-205ENST00000527020 SMUG1Q53HV7 270 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 GGNBP1Q5YKI7 109 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 SLC22A25Q6T423 547 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 BATF2Q8N1L9 274 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 TMEM251Q8N6I4 163 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 FNDC9Q8TBE3 224 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 TOMM40LQ969M1 308 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 REPIN1Q9BWE0 567 aaKnown RBP15.16■□□□□ 0.02
USH1C-205ENST00000527020 PRRG4Q9BZD6 226 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 TUBD1Q9UJT1 453 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 KNTC1P50748 2209 aa15.16■□□□□ 0.02
USH1C-205ENST00000527020 CDX4O14627 284 aaPredicted RBP15.15■□□□□ 0.02
USH1C-205ENST00000527020 HKR1P10072 659 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 ZNF273Q14593 569 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 PLA2G2CQ5R387 149 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 LINC00696Q6ZRV3 163 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 SLC25A26Q70HW3 274 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 OR56B2PQ8NGI1 322 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 MEMO1Q9Y316 297 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 RAB19A4D1S5 217 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 ZNF728P0DKX0 622 aa15.15■□□□□ 0.02
USH1C-205ENST00000527020 ITGA3P26006 1051 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms