RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PLEKHA2Q9HB19 425 aa10.13□□□□□ -0.79
LINC01001-201ENST00000526704 PTRH2Q9Y3E5 179 aaKnown RBP10.13□□□□□ -0.79
LINC01001-201ENST00000526704 HS3ST3B1Q9Y662 390 aa10.13□□□□□ -0.79
LINC01001-201ENST00000526704 POMT1Q9Y6A1 747 aa10.13□□□□□ -0.79
LINC01001-201ENST00000526704 IGKV1-12A0A0C4DH73 117 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 MASP2O00187 686 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 GEMIN2O14893 280 aaKnown RBP10.12□□□□□ -0.79
LINC01001-201ENST00000526704 IGKV1D-12P01611 117 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 IFNA4P05014 189 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 CXCL12P48061 93 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 DVL1P1P54792 670 aaPredicted RBP10.12□□□□□ -0.79
LINC01001-201ENST00000526704 RAC1P63000 192 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 FAM3AP98173 230 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 EXT1Q16394 746 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 AVPI1Q5T686 147 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 OR10AD1Q8NGE0 317 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 OR1F12Q8NHA8 337 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 CLDN23Q96B33 292 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 CCDC187A0A096LP49 1063 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 FAM221AA4D161 298 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 OR6C6A6NF89 314 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 KLF7O75840 302 aaPredicted RBP10.12□□□□□ -0.79
LINC01001-201ENST00000526704 CST2P09228 141 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 B3GALT5-AS1P59052 145 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 FXYD4P59646 89 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 KRTAP27-1Q3LI81 207 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 LYSMD4Q5XG99 296 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 TMEM42Q69YG0 159 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 BRICD5Q6PL45 260 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 SLC22A25Q6T423 547 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 LHFPL2Q6ZUX7 228 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 LYZL2Q7Z4W2 148 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 M1APQ8TC57 530 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 RTN4IP1Q8WWV3 396 aaPredicted RBP10.12□□□□□ -0.79
LINC01001-201ENST00000526704 PARP12Q9H0J9 701 aaKnown RBP10.12□□□□□ -0.79
LINC01001-201ENST00000526704 WFDC1Q9HC57 220 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 CRLF2Q9HC73 371 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 TMEM38BQ9NVV0 291 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 WNT16Q9UBV4 365 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 CACFD1Q9UGQ2 172 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 ZDHHC8Q9ULC8 765 aa10.12□□□□□ -0.79
LINC01001-201ENST00000526704 A0A0G2JMM0 328 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 A0A1W2PPB8 328 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 A0A1W2PRS3 328 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 COLCA2A8K830 154 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 KIR3DP1A8MWS1 328 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 E5RGE8 158 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 LCATP04180 440 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 PATE4P0C8F1 98 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 B4GALT1P15291 398 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 RBP2P50120 134 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 ABCA11PQ4W5N1 156 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 PHLDA2Q53GA4 152 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 ZNF468Q5VIY5 522 aaPredicted RBP10.11□□□□□ -0.79
LINC01001-201ENST00000526704 ETV3LQ6ZN32 361 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 Q6ZPA2 131 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 SKA3Q8IX90 412 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 LRTM2Q8N967 370 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 NAXEQ8NCW5 288 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 AKR7LQ8NHP1 331 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 MR1Q95460 341 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 BORCS8Q96FH0 119 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 AKR1E2Q96JD6 320 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 C18orf12Q96KH6 178 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 ALKBH3Q96Q83 286 aaPredicted RBP10.11□□□□□ -0.79
LINC01001-201ENST00000526704 SLC2A9Q9NRM0 540 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 NSG2Q9Y328 171 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 H7C1Q1 480 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 XRCC2O43543 280 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 DIRAS3O95661 229 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 ZNF32P17041 273 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 IL11RAQ14626 422 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 PEA15Q15121 130 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 SWI5Q1ZZU3 235 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 FAM76BQ5HYJ3 339 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 TMEM156Q8N614 296 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 IFI44Q8TCB0 444 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 C2CD4CQ8TF44 421 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 SECTM1Q8WVN6 248 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 SF3B5Q9BWJ5 86 aaKnown RBP10.11□□□□□ -0.79
LINC01001-201ENST00000526704 KCNIP3Q9Y2W7 256 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 STARD10Q9Y365 291 aa10.11□□□□□ -0.79
LINC01001-201ENST00000526704 NRASP01111 189 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 DMDP11532 3685 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 HAAOP46952 286 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 HTR5AP47898 357 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 MLF1P58340 268 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 HLA-BQ31612 363 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 MIDNQ504T8 468 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 ZFP82Q8N141 532 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 FBXL14Q8N1E6 418 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 OSR2Q8N2R0 312 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 OR52M1Q8NGK5 317 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 OR5L1Q8NGL2 311 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 OR11L1Q8NGX0 322 aa10.1□□□□□ -0.79
LINC01001-201ENST00000526704 MSI2Q96DH6 328 aaKnown RBP10.1□□□□□ -0.79
LINC01001-201ENST00000526704 SCRT1Q9BWW7 348 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms