RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PABPC1L2AQ5JQF8 200 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ELFN2Q5R3F8 820 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 HIST2H3PS2Q5TEC6 136 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 TMPRSS11AQ6ZMR5 421 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ZNF704Q6ZNC4 412 aaPredicted RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 TMEM182Q6ZP80 229 aaPredicted RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 PLEKHG7Q6ZR37 379 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 USP43Q70EL4 1123 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 AHSA2Q719I0 299 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 HIST2H3AQ71DI3 136 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 DCXRQ7Z4W1 244 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 MDP1Q86V88 176 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 OR1J2Q8NGS2 313 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 OR1F12Q8NHA8 337 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 AKR7LQ8NHP1 331 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 FGFBP3Q8TAT2 258 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 SSC4DQ8WTU2 575 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 C17orf50Q8WW18 174 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ASB17Q8WXJ9 295 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 SLAMF6Q96DU3 332 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 WFIKKN1Q96NZ8 548 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 UHRF2Q96PU4 802 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 TBX5Q99593 518 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ABHD6Q9BV23 337 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 TPPP3Q9BW30 176 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 C1QTNF6Q9BXI9 259 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 MROQ9BYG7 248 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 OR2H1Q9GZK4 316 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 CCDC90BQ9GZT6 254 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 INPP5EQ9NRR6 644 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 FKBP14Q9NWM8 211 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 PLEK2Q9NYT0 353 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 ERVK-18Q9QC07 812 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 CLEC2DQ9UHP7 191 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 FBXL3Q9UKT7 428 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 DIMT1Q9UNQ2 313 aaKnown RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 ERGIC3Q9Y282 383 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 EXOSC1Q9Y3B2 195 aaKnown RBP3.79□□□□□ -1.8
USP48-211ENST00000526044 SLC25A15Q9Y619 301 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 COMMD3-BMI1R4GMX3 469 aa3.79□□□□□ -1.8
USP48-211ENST00000526044 USP24Q9UPU5 2620 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ITPR1Q14643 2758 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 A0A087WXM4 84 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 MFSD2BA6NFX1 497 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 F5H5K5 113 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 F8WDY8 70 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 J3QLW9 94 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 M0R1B8 84 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 P2RY10O00398 339 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 MAGEB4O15481 346 aaPredicted RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 SYNGR3O43761 229 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF254O75437 659 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 SULT1C4O75897 302 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 TNFAIP8O95379 198 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 APOC1P02654 83 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 RLN1P04808 185 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 KRT8P05787 483 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 S100A9P06702 114 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 RPSAP08865 295 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 FAM106CPP0CH98 169 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 COX5BP10606 129 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 AREGP15514 252 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF19P17023 458 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 CCNOP22674 350 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ANOS1P23352 680 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 STOMP27105 288 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 HSD11B1P28845 292 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 APLNRP35414 380 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 WNT5AP41221 380 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 HTR5AP47898 357 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 GDI2P50395 445 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF83P51522 516 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 IDH3GP51553 393 aaPredicted RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 RIDAP52758 137 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 OR12D2P58182 307 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 GABARAPL2P60520 117 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 GRB2P62993 217 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 GALK2Q01415 458 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF85Q03923 595 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 TFF3Q07654 80 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 SNTB2Q13425 540 aaKnown RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 RAB35Q15286 201 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 TBC1D28Q2M2D7 210 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 PCGF3Q3KNV8 242 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 GFI1BQ5VTD9 330 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 LIPNQ5VXI9 398 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 RNLSQ5VYX0 342 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF774Q6NX45 483 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 DEGS2Q6QHC5 323 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ARL9Q6T311 187 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF322Q6U7Q0 402 aaPredicted RBP3.78□□□□□ -1.8
USP48-211ENST00000526044 KCTD8Q6ZWB6 473 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 PRSS48Q7RTY5 328 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 FAM220AQ7Z4H9 259 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF329Q86UD4 541 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 NFE4Q86UQ8 179 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 ZNF283Q8N7M2 679 aa3.78□□□□□ -1.8
USP48-211ENST00000526044 YIPF7Q8N8F6 280 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms