RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PSMD4P55036 377 aaKnown RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 GNGT1P63211 74 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 HPCAP84074 193 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ZNF45Q02386 682 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 STX5Q13190 355 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 SELPLGQ14242 412 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 LRRC36Q1X8D7 754 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 NDUFAF6Q330K2 333 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 VPS26BQ4G0F5 336 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 C1orf185Q5T7R7 199 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 METTL21CQ5VZV1 264 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TIGD3Q6B0B8 471 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 SLC25A24Q6NUK1 477 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 CBLN3Q6UW01 205 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 CLEC18BQ6UXF7 455 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 Q6ZPB1 254 aaPredicted RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 ZNF621Q6ZSS3 439 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 C16orf62Q7Z3J2 963 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 HMGN2P46Q86SG4 172 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 DHDDSQ86SQ9 333 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 MARCH3Q86UD3 253 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TGIF2LYQ8IUE0 185 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ERI1Q8IV48 349 aaKnown RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 CEND1Q8N111 149 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 C10orf111Q8N326 155 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ANKFN1Q8N957 763 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 FADS6Q8N9I5 356 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 GATSQ8NAP1 163 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 FAM83FQ8NEG4 500 aaPredicted RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 ZNF680Q8NEM1 530 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 OR2M3Q8NG83 312 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 OR1J4Q8NGS1 313 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 FAM57AQ8TBR7 257 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 GTF2H4Q92759 462 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 RAB8BQ92930 207 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 HAVCR1Q96D42 359 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ITCHQ96J02 903 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 SDF2Q99470 211 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 KLHDC3Q9BQ90 382 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TPPP3Q9BW30 176 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TBL1XR1Q9BZK7 514 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 DEFB127Q9H1M4 99 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 NARFLQ9H6Q4 476 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 RMND5AQ9H871 391 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TPT1P8Q9HAU6 139 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 SPACA1Q9HBV2 294 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 SAR1AQ9NR31 198 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 NUDT15Q9NV35 164 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 EXD2Q9NVH0 621 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 VAPAQ9P0L0 249 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 DKKL1Q9UK85 242 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 B9D1Q9UPM9 204 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 IFT52Q9Y366 437 aa2.73□□□□□ -1.97
CD44-219ENST00000525685 TPRP12270 2363 aaKnown RBP2.73□□□□□ -1.97
CD44-219ENST00000525685 ITPR1Q14643 2758 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 EPG5Q9HCE0 2579 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 DSPPQ9NZW4 1301 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 TRGV5A0A0B4J1U4 118 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 A0A1W2PQD3 144 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 XKRY2A2RUG3 117 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 GMNCA6NCL1 334 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 SNTNA6NMZ2 147 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 BBIP1A8MTZ0 92 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 MRASO14807 208 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 BCKDKO14874 412 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 ANGPT2O15123 496 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 GMFGO60234 142 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 FCMRO60667 390 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 HCN1O60741 890 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 SLC19A2O60779 497 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 BCAS1O75363 584 aaPredicted RBP2.72□□□□□ -1.97
CD44-219ENST00000525685 UGT2B17O75795 530 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 CBR3O75828 277 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 TRAPPC6AO75865 159 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 H6PDO95479 791 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 IFNA14P01570 189 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 IGHV3-23P01764 117 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 BCHEP06276 602 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 GUSBP08236 651 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 ZNF17P17021 662 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 ATP6V1C1P21283 382 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 TBXA2RP21731 343 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 RPS4Y1P22090 263 aaKnown RBP2.72□□□□□ -1.97
CD44-219ENST00000525685 CRATP43155 626 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 CA7P43166 264 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 STARP49675 285 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 GBX2P52951 348 aaPredicted RBP2.72□□□□□ -1.97
CD44-219ENST00000525685 DSCR4P56555 118 aaPredicted RBP2.72□□□□□ -1.97
CD44-219ENST00000525685 CLDN18P56856 261 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 MTPNP58546 118 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 RAB14P61106 215 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 ZNF117Q03924 483 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 FOXF1Q12946 379 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 FADDQ13158 208 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 SKP2Q13309 424 aa2.72□□□□□ -1.97
CD44-219ENST00000525685 CAPRIN1Q14444 709 aaKnown RBP2.72□□□□□ -1.97
CD44-219ENST00000525685 GANABQ14697 944 aaKnown RBP2.72□□□□□ -1.97
CD44-219ENST00000525685 RGNQ15493 299 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms