RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 UCHL3P15374 230 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ZNF44P15621 663 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 RCC1P18754 421 aaPredicted RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 ELK1P19419 428 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TBPP20226 339 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 PVALBP20472 110 aaPredicted RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 CHI3L1P36222 383 aaPredicted RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 GGT2P36268 569 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ETV6P41212 452 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 NPBWR2P48146 333 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TTPAP49638 278 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 RAB7AP51149 207 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 MFAP2P55001 183 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OR4D2P58180 307 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TAS2R41P59536 307 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 STXBP1P61764 594 aaKnown RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 SNRPD2P62316 118 aaKnown RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 CDKL1Q00532 357 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 HMGCS1Q01581 520 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 FABP9Q0Z7S8 132 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 NSDHLQ15738 373 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 MRPL23Q16540 153 aaKnown RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 CDKN3Q16667 212 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 KCTD19Q17RG1 926 aaPredicted RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 SCGB2B2Q4G0G5 96 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OCIAD2Q56VL3 154 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OR52W1Q6IF63 320 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ACOT7LQ6ZUV0 252 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 MOB2Q70IA6 237 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 PRSS48Q7RTY5 328 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TMED4Q7Z7H5 227 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 SERPINA9Q86WD7 417 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 CRLF3Q8IUI8 442 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TRAPPC5Q8IUR0 188 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 FBXO16Q8IX29 292 aaPredicted RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 UBALD2Q8IYN6 164 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 PRR22Q8IZ63 422 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 CMTM8Q8IZV2 173 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 LGI3Q8N145 548 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OR6V1Q8N148 313 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 SYS1Q8N2H4 156 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OR51S1Q8NGJ8 323 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OR5L1Q8NGL2 311 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OR4P4Q8NGL7 312 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ZNF564Q8TBZ8 553 aaPredicted RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 VN1R17PQ8TDU5 208 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 PHF10Q8WUB8 498 aaKnown RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 ORAOV1Q8WV07 137 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 C1orf54Q8WWF1 131 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 GLYATL1Q969I3 302 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 SLCO4A1Q96BD0 722 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 YIPF6Q96EC8 236 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 DCUN1D1Q96GG9 259 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 VSIG2Q96IQ7 327 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ZNF75AQ96N20 296 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TGM7Q96PF1 710 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TMEM121Q9BTD3 319 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 FICDQ9BVA6 458 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 OSBPL11Q9BXB4 747 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 BEX2Q9BXY8 128 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ULBP2Q9BZM5 246 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 C20orf85Q9H1P6 137 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ZNF385DQ9H6B1 395 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 RASL12Q9NYN1 266 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 COPS7AQ9UBW8 275 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 SS18L2Q9UHA2 77 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ZNF391Q9UJN7 358 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 JPT1Q9UK76 154 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 EMCNQ9ULC0 261 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 PSG8Q9UQ74 426 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 ANGPT4Q9Y264 503 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 SLC17A4Q9Y2C5 497 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 RBM7Q9Y580 266 aaKnown RBP2.74□□□□□ -1.97
CD44-217ENST00000525348 MTCH2Q9Y6C9 303 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 LAMB4A4D0S4 1761 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 PPLO60437 1756 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 MYH8P13535 1937 aa2.74□□□□□ -1.97
CD44-217ENST00000525348 TNRC6CQ9HCJ0 1690 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 FOCADQ5VW36 1801 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 A0A1B0GVI7 797 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TMEM129A0AVI4 362 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 IGSF23A1L1A6 192 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 GJE1A6NN92 205 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 COLCA2A8K830 154 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 C9JVG2 144 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 F6UZH7 168 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 C15orf65H3BRN8 121 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RPL36A-HNRNPH2H7BZ11 118 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 SDHDO14521 159 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TNFSF11O14788 317 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 PPP1R2P9O14990 202 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 NBR2O15453 112 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 RAD51CO43502 376 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 MFSD11O43934 449 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 EDF1O60869 148 aaKnown RBP2.73□□□□□ -1.97
CD44-217ENST00000525348 PIAS1O75925 651 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 TNFSF15O95150 251 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 SLC25A27O95847 323 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 MT-CO2P00403 227 aa2.73□□□□□ -1.97
CD44-217ENST00000525348 PRB2P02812 416 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms