RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RGCCQ9H4X1 137 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 ASB7Q9H672 318 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 CHRAC1Q9NRG0 131 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 RBM22Q9NW64 420 aaKnown RBP eCLIP1.69□□□□□ -2.14
CD44-215ENST00000525241 TAC3Q9UHF0 121 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 PSME2Q9UL46 239 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 CFL2Q9Y281 166 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 ACOT9Q9Y305 439 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 TRAPPC1Q9Y5R8 145 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 LOC100653049A0A140TA62 436 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 K7EPK0 472 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 KRT34O76011 436 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 RHOCP08134 193 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 SFTPCP11686 197 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 ZNF708P17019 499 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 SRMP19623 302 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 PEX19P40855 299 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 SLC18A1P54219 525 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 RPL31P62899 125 aaKnown RBP1.68□□□□□ -2.14
CD44-215ENST00000525241 TOMM34Q15785 309 aaPredicted RBP1.68□□□□□ -2.14
CD44-215ENST00000525241 ATP6V1FQ16864 119 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 TCF24Q7RTU0 167 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 AMN1Q8IY45 258 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 FBXO36Q8NEA4 188 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 OR5T3Q8NGG3 340 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 OR8A1Q8NGG7 326 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 NT5CQ8TCD5 201 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 METTL26Q96S19 204 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 PORCNQ9H237 461 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 DDIT4Q9NX09 232 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 SLC7A11Q9UPY5 501 aa1.68□□□□□ -2.14
CD44-215ENST00000525241 ZNF443Q9Y2A4 671 aaPredicted RBP1.68□□□□□ -2.14
CD44-215ENST00000525241 SETD1AO15047 1707 aaKnown RBP1.67□□□□□ -2.14
CD44-215ENST00000525241 ZNF729A6NN14 1252 aaPredicted RBP1.67□□□□□ -2.14
CD44-215ENST00000525241 C17orf51A8MQB3 221 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 H7C2Y5 167 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 PLEKHA8P1O95397 391 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 CD9P21926 228 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 CCT6AP40227 531 aaKnown RBP1.67□□□□□ -2.14
CD44-215ENST00000525241 BCAP31P51572 246 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 TAS2R60P59551 318 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 SSX1Q16384 188 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 ZFP82Q8N141 532 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 C3orf22Q8N5N4 141 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 OR2K2Q8NGT1 345 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 NDNFQ8TB73 568 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 SRRQ9GZT4 340 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 COA1Q9GZY4 146 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 DDX18Q9NVP1 670 aaKnown RBP1.67□□□□□ -2.14
CD44-215ENST00000525241 INSIG2Q9Y5U4 225 aa1.67□□□□□ -2.14
CD44-215ENST00000525241 IGHV3-43A0A0B4J1X8 118 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 GOLGA6L7A0A1B0GV03 622 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 A0A1W2PNM2 257 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 M0R1B8 84 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 RGS5O15539 181 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 RNF113AO15541 343 aaKnown RBP1.66□□□□□ -2.14
CD44-215ENST00000525241 IGKV1D-33P01593 117 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 IGKV1-33P01594 117 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 MSR1P21757 451 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 IMPA1P29218 277 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 P2RY2P41231 377 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 HTR2BP41595 481 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 PSMC5P62195 406 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 IFFO1Q0D2I5 559 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 DOC2AQ14183 400 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 LGALSLQ3ZCW2 172 aaPredicted RBP1.66□□□□□ -2.14
CD44-215ENST00000525241 ZNF404Q494X3 552 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 ASCL4Q6XD76 172 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 SPNS3Q6ZMD2 512 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 Q6ZQT7 251 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 TMPPEQ6ZT21 453 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 CPNE9Q8IYJ1 553 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 CCNYL1Q8N7R7 359 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 UBA3Q8TBC4 463 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 OR5P3Q8WZ94 311 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 SLC25A44Q96H78 314 aaPredicted RBP1.66□□□□□ -2.14
CD44-215ENST00000525241 RILPQ96NA2 401 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 ZNF706Q9Y5V0 76 aaPredicted RBP1.66□□□□□ -2.14
CD44-215ENST00000525241 KPTNQ9Y664 436 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 ZNF780BQ9Y6R6 833 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 BRD4O60885 1362 aaPredicted RBP1.66□□□□□ -2.14
CD44-215ENST00000525241 PCNX2A6NKB5 2137 aa1.66□□□□□ -2.14
CD44-215ENST00000525241 IGHV3-21A0A0B4J1V1 117 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 A0A0B4J2C4 111 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 LOC389332A0A1B0GUA5 103 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 ANKRD20A5PA0PJZ0 165 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 A8MWP4 228 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 ETHE1O95571 254 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 DHRS2Q13268 280 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 SYT6Q5T7P8 510 aaPredicted RBP1.65□□□□□ -2.15
CD44-215ENST00000525241 DUPD1Q68J44 220 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 LINC00523Q86TU6 105 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 LYPD6Q86Y78 171 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 TOP1MTQ969P6 601 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 KIAA1143Q96AT1 154 aaPredicted RBP1.65□□□□□ -2.15
CD44-215ENST00000525241 CENPNQ96H22 339 aaPredicted RBP1.65□□□□□ -2.15
CD44-215ENST00000525241 CHID1Q9BWS9 393 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 SHCBP1LQ9BZQ2 653 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 TSGA10Q9BZW7 698 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 TXNIPQ9H3M7 391 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms