RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 C1orf100Q5SVJ3 147 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 HES5Q5TA89 166 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 ASCL4Q6XD76 172 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 ACP7Q6ZNF0 438 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 Q6ZS46 218 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 LHFPL2Q6ZUX7 228 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 C5orf24Q7Z6I8 188 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 ANKRD13BQ86YJ7 626 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 CLVS1Q8IUQ0 354 aaPredicted RBP5.41□□□□□ -1.54
CD44-214ENST00000525211 LRRC75A-AS1Q8N1F1 130 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 POC1AQ8NBT0 407 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 TMEM104Q8NE00 496 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 OR5H6Q8NGV6 325 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 CLDND2Q8NHS1 167 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 TNFAIP8L1Q8WVP5 186 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 WFDC12Q8WWY7 111 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 HIST1H2AAQ96QV6 131 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 MYCBPQ99417 103 aaPredicted RBP5.41□□□□□ -1.54
CD44-214ENST00000525211 SMR3AQ99954 134 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 FOXC2Q99958 501 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 SLC22A4Q9H015 551 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 BANF2Q9H503 90 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 FN3KRPQ9HA64 309 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 ELL3Q9HB65 397 aaPredicted RBP5.41□□□□□ -1.54
CD44-214ENST00000525211 HES4Q9HCC6 221 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 TMEM138Q9NPI0 162 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 C14orf119Q9NWQ9 140 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 RNF7Q9UBF6 113 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 ZNF222Q9UK12 451 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 SSR3Q9UNL2 185 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 ING4Q9UNL4 249 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 SLC7A11Q9UPY5 501 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 NPTNQ9Y639 398 aa5.41□□□□□ -1.54
CD44-214ENST00000525211 MAP1AP78559 2803 aaPredicted RBP5.41□□□□□ -1.54
CD44-214ENST00000525211 YLPM1P49750 1951 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 SETD2Q9BYW2 2564 aaPredicted RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 CSPG4Q6UVK1 2322 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 TRAV1-2A0A0B4J238 106 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 TMEM82A0PJX8 343 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 MEX3AA1L020 520 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 RFPL4AA6NLU0 287 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CEACAM18A8MTB9 384 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 F5H0A9 414 aaPredicted RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 RFPL4AL1F8VTS6 287 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 H7C1Q1 480 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 LGALS8O00214 317 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 SLC22A1O15245 554 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 NOS1APO75052 506 aaPredicted RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 KDM4BO94953 1096 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 SERPINA3P01011 423 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CD2P06729 351 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 TMEM225BP0DP42 221 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 PSG2P11465 335 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 PRKACBP22694 351 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 ZFP36P26651 326 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 ZNF93P35789 620 aaPredicted RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 GPR6P46095 362 aaPredicted RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 ATP1B3P54709 279 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 MRPS11P82912 194 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 IL24Q13007 206 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 UNC119Q13432 240 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CNN3Q15417 329 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 ZNF181Q2M3W8 571 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 TEX36Q5VZQ5 186 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 STUMQ69YW2 141 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 SIGIRRQ6IA17 410 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CDPF1Q6NVV7 123 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 Q6P435 159 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 GLIPR1L1Q6UWM5 242 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 ZNF841Q6ZN19 808 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 NLRC3Q7RTR2 1065 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 GPR141Q7Z602 305 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 LRRC28Q86X40 367 aaPredicted RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 MRPL41Q8IXM3 137 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 JAGN1Q8N5M9 183 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 FAM216BQ8N7L0 139 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 DTX3Q8N9I9 347 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 SPERTQ8NA61 448 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 OR51D1Q8NGF3 324 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 OR51F2Q8NH61 342 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 ANGPTL6Q8NI99 470 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 FAM168AQ92567 244 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 SPSB1Q96BD6 273 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CEP19Q96LK0 163 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 GAFA1Q96PS6 74 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CCL13Q99616 98 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 GAL3ST1Q99999 423 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 PKIBQ9C010 78 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 EGLN1Q9GZT9 426 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 CHODLQ9H9P2 273 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 SMURF1Q9HCE7 757 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 TCF7L1Q9HCS4 588 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 OR5V1Q9UGF6 321 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 MRPS28Q9Y2Q9 187 aaKnown RBP5.4□□□□□ -1.54
CD44-214ENST00000525211 MAB21L2Q9Y586 359 aa5.4□□□□□ -1.54
CD44-214ENST00000525211 MALRD1Q5VYJ5 2156 aa5.4□□□□□ -1.55
CD44-214ENST00000525211 ZANQ9Y493 2812 aa5.39□□□□□ -1.55
CD44-214ENST00000525211 PPIAL4EA0A075B759 164 aa5.39□□□□□ -1.55
CD44-214ENST00000525211 TMEM272A0A1B0GTI8 110 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms