RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 LIME1Q9H400 295 aa13.36□□□□□ -0.27
GSDMD-202ENST00000524846 NOSIPQ9Y314 301 aaKnown RBP13.36□□□□□ -0.27
GSDMD-202ENST00000524846 STRAPQ9Y3F4 350 aaKnown RBP13.36□□□□□ -0.27
GSDMD-202ENST00000524846 IGHMP01871 453 aa13.36□□□□□ -0.27
GSDMD-202ENST00000524846 RAB11AP62491 216 aa13.36□□□□□ -0.27
GSDMD-202ENST00000524846 NAA60Q9H7X0 242 aa13.36□□□□□ -0.27
GSDMD-202ENST00000524846 ZNF705GA8MUZ8 300 aaPredicted RBP13.35□□□□□ -0.27
GSDMD-202ENST00000524846 H3BP45 60 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 CHST5Q9GZS9 411 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 PLEK2Q9NYT0 353 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 WSB1Q9Y6I7 421 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 A0A087X0M5 115 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 A0A1B0GX30 115 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 A0A1W2PQD3 144 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 LIPT2A6NK58 231 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 ZFP92A6NM28 416 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 CEACAM18A8MTB9 384 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 ERVFRD-1P60508 538 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 EWSR1Q01844 656 aaKnown RBP eCLIP13.35□□□□□ -0.27
GSDMD-202ENST00000524846 NTNG2Q96CW9 530 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 MUCL1Q96DR8 90 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 SSX3Q99909 188 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 NECAP2Q9NVZ3 263 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 HS3ST3A1Q9Y663 406 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 MYO7BQ6PIF6 2116 aa13.35□□□□□ -0.27
GSDMD-202ENST00000524846 A0A087WZY1 265 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 IGHV3-15A0A0B4J1V0 119 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 IGHV4-34P06331 123 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 SOD3P08294 240 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 FOLR1P15328 257 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 RNF4P78317 190 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 UNQ6494/PRO21346Q6UXR6 183 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 OR14L1PQ8NHC6 308 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 OPA3Q9H6K4 179 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 SLC2A9Q9NRM0 540 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 GNG13Q9P2W3 67 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 TUBD1Q9UJT1 453 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HS3ST3B1Q9Y662 390 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HSPA12AO43301 675 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BKO60814 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BJP06899 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 PNLIPP16233 465 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BOP23527 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BBP33778 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 OR1D5P58170 312 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BDP58876 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BCP62807 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST2H2BEQ16778 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.34□□□□□ -0.27
GSDMD-202ENST00000524846 C1orf53Q5VUE5 145 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 LGI3Q8N145 548 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BHQ93079 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 SNX22Q96L94 193 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BNQ99877 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 HIST1H2BMQ99879 126 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 NKX2-6A6NCS4 301 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 TSTD3H0UI37 97 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 SCAF4O95104 1147 aaKnown RBP13.34□□□□□ -0.27
GSDMD-202ENST00000524846 GNRHRP30968 328 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 OR2C3Q8N628 320 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 NOXO1Q8NFA2 376 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 OR5C1Q8NGR4 320 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 POM121Q96HA1 1249 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 C14orf144Q96I85 54 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 SYT3Q9BQG1 590 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 GINS3Q9BRX5 216 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 SMOC1Q9H4F8 434 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 ZNF442Q9H7R0 627 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 UNKLQ9H9P5 680 aaKnown RBP13.34□□□□□ -0.27
GSDMD-202ENST00000524846 FBLN5Q9UBX5 448 aa13.34□□□□□ -0.27
GSDMD-202ENST00000524846 ZNF814B7Z6K7 855 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 NDUFB7P17568 137 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 SMAD4Q13485 552 aaKnown RBP13.33□□□□□ -0.27
GSDMD-202ENST00000524846 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 ZNF695Q8IW36 515 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 PLPP5Q8NEB5 264 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 LFNGQ8NES3 379 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 OR1L3Q8NH93 324 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 NUDT16L1Q9BRJ7 211 aaKnown RBP13.33□□□□□ -0.27
GSDMD-202ENST00000524846 MOB1AQ9H8S9 216 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 ALKBH4Q9NXW9 302 aa13.33□□□□□ -0.27
GSDMD-202ENST00000524846 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 TLCD2A6NGC4 264 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 H3BMH7 237 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 EPHA1P21709 976 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 SSX2Q16385 188 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 GPR157Q5UAW9 335 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 SLC35G3Q8N808 338 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 SCRT1Q9BWW7 348 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 SHANK1Q9Y566 2161 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 BTBD17A6NE02 478 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 SEC14L6B5MCN3 397 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 EFNA2O43921 213 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 HLA-HP01893 362 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 NKX2-1P43699 371 aaPredicted RBP13.33□□□□□ -0.28
GSDMD-202ENST00000524846 CSNK1A1P48729 337 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 TMEM187Q14656 261 aa13.33□□□□□ -0.28
GSDMD-202ENST00000524846 NECAP1Q8NC96 275 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms