RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 LRBAP50851 2863 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 LINC00854A0A1B0GVQ3 168 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 PQLC2LA1A4F0 135 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 C5orf49A4QMS7 147 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 A6NIN4 97 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 DISC1C4P0D8 188 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 BOLA2-SMG1P6H3BVE0 249 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 HLA-HP01893 362 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 C1QBP02746 253 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 MT-ND4P03905 459 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 GLAP06280 429 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 THBDP07204 575 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 ACAA1P09110 424 aaPredicted RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 CD79AP11912 226 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 CBR1P16152 277 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 MGMTP16455 207 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 EPHA1P21709 976 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 DTYMKP23919 212 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 ERP29P30040 261 aaKnown RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 HOXC12P31275 282 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 OR3A4PP47883 348 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 SRP9P49458 86 aaKnown RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 EIF2B2P49770 351 aaKnown RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 MTCP1P56278 107 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 TAS2R46P59540 309 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 UBE2NP61088 152 aaKnown RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 PLA2G7Q13093 441 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 MAB21L1Q13394 359 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 TNK1Q13470 666 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 SURF2Q15527 256 aaPredicted RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 GABRA6Q16445 453 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS11-201ENST00000524454 CEACAM21Q3KPI0 293 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 ZFP69Q49AA0 526 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 CDNFQ49AH0 187 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 ATAD3CQ5T2N8 411 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 SEZ6L2Q6UXD5 910 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 GLDNQ6ZMI3 551 aaPredicted RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 MRPL21Q7Z2W9 205 aaKnown RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 CXorf67Q86X51 503 aaPredicted RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 IZUMO1Q8IYV9 350 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 ZDHHC22Q8N966 263 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 SLC30A7Q8NEW0 376 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 OR5A2Q8NGI9 324 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 OR4C16Q8NGL9 310 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 FGFBP3Q8TAT2 258 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 TNFAIP8L1Q8WVP5 186 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 ST8SIA4Q92187 359 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 GTF3AQ92664 365 aaKnown RBP6.06□□□□□ -1.44
VPS11-201ENST00000524454 PIK3IP1Q96FE7 263 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 DMRTB1Q96MA1 342 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 SCGB3A2Q96PL1 93 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 PKIBQ9C010 78 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 MED28Q9H204 178 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 OR10A4Q9H209 315 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 OR51J1Q9H342 316 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 NOX3Q9HBY0 568 aa6.06□□□□□ -1.44
VPS11-201ENST00000524454 A0A0A6YYJ9 748 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 A0A1B0GWJ7 208 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 UBE2QL1A1L167 161 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 FAM221AA4D161 298 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 DEFB108AA8MXU0 73 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 C16orf97H3BN30 126 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 H3BSH0 61 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 CREBL2O60519 120 aaPredicted RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 CRTAPO75718 401 aaPredicted RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 LYZL6O75951 148 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 RGS11O94810 467 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 RAB3DO95716 219 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 MPIG6BO95866 241 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 IGLV1-44P01699 117 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 CSTBP04080 98 aaKnown RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 CD3DP04234 171 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 SULT1A3P0DMM9 295 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 SULT1A4P0DMN0 295 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 ANXA3P12429 323 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 RAC2P15153 192 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 GNG2P59768 71 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 PDZK1IP1Q13113 114 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 DAZAP2Q15038 168 aaPredicted RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 RSU1Q15404 277 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 MPPED2Q15777 294 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 MPV17LQ2QL34 196 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 RNASE10Q5GAN6 216 aaKnown RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 ZNF626Q68DY1 528 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 LPCAT3Q6P1A2 487 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 SHISA2Q6UWI4 295 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 ZNF782Q6ZMW2 699 aaPredicted RBP6.05□□□□□ -1.44
VPS11-201ENST00000524454 Q6ZS49 121 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 TMEM17Q86X19 198 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 HOGA1Q86XE5 327 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 ZNF573Q86YE8 665 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 MKXQ8IYA7 352 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 Q8IYB0 196 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 ZDHHC23Q8IYP9 409 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 TMEM104Q8NE00 496 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 OR51T1Q8NGJ9 327 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 OR2AE1Q8NHA4 323 aa6.05□□□□□ -1.44
VPS11-201ENST00000524454 GIMAP1Q8WWP7 306 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms