RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ZNF418Q8TF45 676 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 C22orf15Q8WYQ4 148 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TFGQ92734 400 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 CDS1Q92903 461 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ISOC2Q96AB3 205 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 S100PBPQ96BU1 408 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 CMTM7Q96FZ5 175 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 C1orf147Q96MC9 270 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 LYSMD1Q96S90 227 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 MED18Q9BUE0 208 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 C1orf50Q9BV19 199 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SLC19A3Q9BZV2 496 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ALX4Q9H161 411 aaPredicted RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 RPF2Q9H7B2 306 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 NANSQ9NR45 359 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 THUMPD1Q9NXG2 353 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SCN3BQ9NY72 215 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 KLHL21Q9UJP4 597 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 MRTO4Q9UKD2 239 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 ICAM5Q9UMF0 924 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 SAMD4AQ9UPU9 718 aaKnown RBP4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TMED3Q9Y3Q3 217 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 PEX16Q9Y5Y5 336 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 CDH10Q9Y6N8 788 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 HSPE1-MOB4S4R3N1 261 aa4.3□□□□□ -1.72
PABPC1-223ENST00000523636 TRAV18A0A075B6X5 111 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 A0A096LPI6 279 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TRGV5A0A0B4J1U4 118 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 NPIPA5A0A0B4J1W7 369 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TRBV5-4A0A0C4DH59 114 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 A0A1W2PRD5 423 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 LRP5LA4QPB2 252 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 NKX6-3A6NJ46 265 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 C17orf105B2RV13 164 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 E5RGE8 158 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 H3BTX0 84 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 MANBAO00462 879 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CXCR6O00574 342 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 OR7A17O14581 309 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 EI24O14681 340 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SGCEO43556 437 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TPST1O60507 370 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CTSVO60911 334 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 HSBP1O75506 76 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TNFSF13O75888 250 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SERPINA1P01009 418 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 GUSBP08236 651 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CD36P16671 472 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 RAB3AP20336 220 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TBXA2RP21731 343 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CERS1P27544 350 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CRABP1P29762 137 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 C21orf33P30042 268 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 MPIP34949 423 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SOX2P48431 317 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 GABARAPL2P60520 117 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 ZP1P60852 638 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 RPL38P63173 70 aaKnown RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 FLI1Q01543 452 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 AESQ08117 197 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 PNRC1Q12796 327 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TPBGQ13641 420 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 ABRAXAS2Q15018 415 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 BSXQ3C1V8 233 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 RFTN2Q52LD8 501 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 KLHL12Q53G59 568 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 CYBRD1Q53TN4 286 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 IDNKQ5T6J7 187 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 C9orf135Q5VTT2 229 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 STUMQ69YW2 141 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 C11orf71Q6IPW1 123 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF773Q6PK81 442 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SCIMPQ6UWF3 145 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SBSNQ6UWP8 590 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 C5orf46Q6UWT4 87 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 LINC00299Q6ZSB3 139 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 DPPA2Q7Z7J5 298 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 PUSL1Q8N0Z8 303 aaKnown RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 THAP8Q8NA92 274 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 ZNF738Q8NE65 137 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 OR52B6Q8NGF0 335 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 OR4D10Q8NGI6 311 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 OR52I1Q8NGK6 324 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 OR13C5Q8NGS8 318 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 OR5K1Q8NHB7 308 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 DYNC2LI1Q8TCX1 351 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 SMAP2Q8WU79 429 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 RAB2BQ8WUD1 216 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 MAFIPQ8WZ33 124 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 YIPF5Q969M3 257 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TMBIM1Q969X1 311 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 TIMD4Q96H15 378 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 PYURFQ96I23 114 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 FOPNLQ96NB1 174 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 APOL4Q9BPW4 351 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 NIPSNAP1Q9BPW8 284 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 RBM38Q9H0Z9 239 aaKnown RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
PABPC1-223ENST00000523636 MYOZ1Q9NP98 299 aaPredicted RBP4.29□□□□□ -1.72
PABPC1-223ENST00000523636 NOX4Q9NPH5 578 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms