RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 CDK6Q00534 326 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 ID2Q02363 134 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 PAX5Q02548 391 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 PTGES3Q15185 160 aaKnown RBP6.17□□□□□ -1.42
CLK4-202ENST00000519132 ACOT7LQ6ZUV0 252 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 LINC01555Q8NAE3 123 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 OR8D4Q8NGM9 314 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 OR1J1Q8NGS3 322 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 UHRF2Q96PU4 802 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 SLC6A7Q99884 636 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 EFCAB11Q9BUY7 163 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 CHRNA10Q9GZZ6 450 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 TUBB1Q9H4B7 451 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 IKZF5Q9H5V7 419 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 NECAP2Q9NVZ3 263 aa6.17□□□□□ -1.42
CLK4-202ENST00000519132 C9JVG2 144 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 NPIPB9F8W1W9 429 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 UBE2KP61086 200 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 MXD1Q05195 221 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 TAF9Q16594 264 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 EIPR1Q53HC9 387 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 SAXO2Q658L1 398 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 SMARCD3Q6STE5 483 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 OR6V1Q8N148 313 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 TMEM163Q8TC26 289 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 NEIL2Q969S2 332 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 TGM7Q96PF1 710 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 NODALQ96S42 347 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 SPRTNQ9H040 489 aaPredicted RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 ZNF230Q9UIE0 474 aaPredicted RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 FARSAQ9Y285 508 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 SNRNP200O75643 2136 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 ADAMTS9Q9P2N4 1935 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 PPIAL4EA0A075B759 164 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 PPIAL4CA0A0B4J2A2 164 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 E7EQ34 232 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 PPIAL4DF5H284 164 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 XRCC2O43543 280 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 LALBAP00709 142 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 ATP1B1P05026 303 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 SERPIND1P05546 499 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 PPIAL4FP0DN26 164 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 AMD1P17707 334 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 CRISP1P54107 249 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 RAB25P57735 213 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 PRDX1Q06830 199 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 VAMP3Q15836 100 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 MRPL23Q16540 153 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 LDLRAD3Q86YD5 345 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 ACBD7Q8N6N7 88 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 SDR9C7Q8NEX9 313 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 OR2A1Q8NGT9 310 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 SLC37A2Q8TED4 501 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 UBE2E3Q969T4 207 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 PINX1Q96BK5 328 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 RPUSD4Q96CM3 377 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 RBP7Q96R05 134 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 ULBP2Q9BZM5 246 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 LOC105371242A0A075B767 164 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 NPIPA5A0A0B4J1W7 369 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 NPIPA5E9PKD4 350 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 E9PQ18 207 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 MANBAO00462 879 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 SH2D1BO14796 132 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 TNFRSF13BO14836 293 aaPredicted RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 UTS2O95399 124 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 MT-CO2P00403 227 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 FAM106CPP0CH98 169 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 ZNF44P15621 663 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 CKS1BP61024 79 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 KIR2DS3Q14952 304 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 FCN2Q15485 313 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 WDR25Q64LD2 544 aaPredicted RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 C17orf64Q86WR6 236 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 LRRC28Q86X40 367 aaPredicted RBP6.16□□□□□ -1.42
CLK4-202ENST00000519132 OR51S1Q8NGJ8 323 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 LMX1AQ8TE12 382 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 NUDCD2Q8WVJ2 157 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 HPSE2Q8WWQ2 592 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 LCN9Q8WX39 176 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 IL17FQ96PD4 163 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 NPIPA1Q9UND3 350 aa6.16□□□□□ -1.42
CLK4-202ENST00000519132 ZDBF2Q9HCK1 2354 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 LILRA5A6NI73 299 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 ZNF587BE7ETH6 402 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 G3V3Y1 287 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 H7C417 338 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 M0R036 132 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 GAPDHP04406 335 aaKnown RBP6.15□□□□□ -1.42
CLK4-202ENST00000519132 AVPR1BP47901 424 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 PPOXP50336 477 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 ATP4BP51164 291 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 MRPS10P82664 201 aaKnown RBP6.15□□□□□ -1.42
CLK4-202ENST00000519132 MS4A2Q01362 244 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 TMEM205Q6UW68 189 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 Q6ZSR9 355 aa6.15□□□□□ -1.42
CLK4-202ENST00000519132 LINC01561Q8N1V8 128 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms