RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 OR5C1Q8NGR4 320 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 C2orf15Q8WU43 125 aaKnown RBP0.48□□□□□ -2.33
PCM1-208ENST00000518877 OR2A7Q96R45 310 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 MRPL20Q9BYC9 149 aaKnown RBP0.48□□□□□ -2.33
PCM1-208ENST00000518877 SRRQ9GZT4 340 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 DEFB129Q9H1M3 183 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 PRORYQ9H606 182 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 MRPS30Q9NP92 439 aaKnown RBP0.48□□□□□ -2.33
PCM1-208ENST00000518877 PXMP2Q9NR77 195 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 RBM12B-AS1Q9P1G2 102 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 ZMAT5Q9UDW3 170 aaKnown RBP0.48□□□□□ -2.33
PCM1-208ENST00000518877 TAC3Q9UHF0 121 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 ORC6Q9Y5N6 252 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 HSPE1-MOB4S4R3N1 261 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 COL4A1P02462 1669 aa0.48□□□□□ -2.33
PCM1-208ENST00000518877 COL4A2P08572 1712 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 MROH5Q6ZUA9 1318 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 FBN2P35556 2912 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 GMNCA6NCL1 334 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 SLC22A20A6NK97 555 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 HACD1B0YJ81 288 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 C9JQL5 133 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 H3BN98 237 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 K7ERS5 55 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 PSIP1O75475 530 aaKnown RBP0.47□□□□□ -2.33
PCM1-208ENST00000518877 AGTP01019 485 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 GCGP01275 180 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 CRABP2P29373 138 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 RAB11AP62491 216 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 BEX3Q00994 111 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 RAD51Q06609 339 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 LAMTOR4Q0VGL1 99 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 SS18Q15532 418 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 BCL2A1Q16548 175 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 CLLU1OSQ5K130 101 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 SSX9Q7RTT3 188 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 CYP4Z2PQ8N1L4 340 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 BAALCQ8WXS3 180 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 ING5Q8WYH8 240 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 JSRP1Q96MG2 331 aaPredicted RBP0.47□□□□□ -2.33
PCM1-208ENST00000518877 OPALINQ96PE5 141 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 ZNF436Q9C0F3 470 aaPredicted RBP0.47□□□□□ -2.33
PCM1-208ENST00000518877 CHRNA10Q9GZZ6 450 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 NMRK1Q9NWW6 199 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 DDIT4Q9NX09 232 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 PRO0628Q9UI54 55 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 DDX19BQ9UMR2 479 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 FADS3Q9Y5Q0 445 aa0.47□□□□□ -2.33
PCM1-208ENST00000518877 MDC1Q14676 2089 aaKnown RBP0.47□□□□□ -2.33
PCM1-208ENST00000518877 NPHP4O75161 1426 aaPredicted RBP0.47□□□□□ -2.33
PCM1-208ENST00000518877 PLEKHG2Q9H7P9 1386 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 IGHV2OR16-5A0A0B4J2B6 119 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 A0A1B0GTI1 187 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 A0A1W2PRD5 423 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 LRRIQ4A6NIV6 560 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 GOLGA8JA6NMD2 632 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 LEUTXA8MZ59 168 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 DFFAO00273 331 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 OPN1SWP03999 348 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 SNRPAP09012 282 aaKnown RBP0.46□□□□□ -2.34
PCM1-208ENST00000518877 GOLGA8HP0CJ92 632 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 OR8G3PP0DMU2 310 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 GFAPP14136 432 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 CD82P27701 267 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 BLVRBP30043 206 aaPredicted RBP0.46□□□□□ -2.34
PCM1-208ENST00000518877 CST6Q15828 149 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 SSX1Q16384 188 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 ZNF404Q494X3 552 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 TTC32Q5I0X7 151 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 BZW1Q7L1Q6 419 aaKnown RBP0.46□□□□□ -2.34
PCM1-208ENST00000518877 DPPA2Q7Z7J5 298 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 ISOC2Q96AB3 205 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 SMIM8Q96KF7 97 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 C9orf72Q96LT7 481 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 C11orf70Q9BRQ4 267 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 OR2D2Q9H210 308 aa0.46□□□□□ -2.34
PCM1-208ENST00000518877 PHLPP2Q6ZVD8 1323 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 A0A075B6Q4 140 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 SYNJ2BP-COX16A0A087WUM0 186 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 LOC389332A0A1B0GUA5 103 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 C19orf71A6NCJ1 209 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 ODF3BA8MYP8 253 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 RGS5O15539 181 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 GABRA1P14867 456 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 HOXB8P17481 243 aaPredicted RBP0.45□□□□□ -2.34
PCM1-208ENST00000518877 M6PRP20645 277 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 CD9P21926 228 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 TUBG1P23258 451 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 IMPA1P29218 277 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 ARL2P36404 184 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 PSMB2P49721 201 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 NUDT2P50583 147 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 HCCSP53701 268 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 CLDN6P56747 220 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 MLF1P58340 268 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 TAS2R39P59534 338 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 TRDNQ13061 729 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 PRDX4Q13162 271 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 IDI1Q13907 227 aa0.45□□□□□ -2.34
PCM1-208ENST00000518877 LYZL2Q7Z4W2 148 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms