RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 DLX1P56177 255 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 GPX6P59796 221 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 C15orf32Q32M92 178 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 TMIGD1Q6UXZ0 262 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 HSD17B13Q7Z5P4 300 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF546Q86UE3 836 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 RPP25LQ8N5L8 163 aaKnown RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 MS4A15Q8N5U1 240 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 NPWQ8N729 165 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 LINC01555Q8NAE3 123 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 FAM110BQ8TC76 370 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 ACOT11Q8WXI4 607 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 CIDECQ96AQ7 238 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 CMTM7Q96FZ5 175 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 NOL4LQ96MY1 436 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 MS4A4EQ96PG1 132 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF184Q99676 751 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 PELOQ9BRX2 385 aaKnown RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 NICN1Q9BSH3 213 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 RNF126Q9BV68 326 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 POTEKPQ9BYX7 375 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 ANKRD60Q9BZ19 345 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 PTGES2Q9H7Z7 377 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 CD274Q9NZQ7 290 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 PCYOX1Q9UHG3 505 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 ZNF223Q9UK11 482 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 C15orf41Q9Y2V0 281 aa3.47□□□□□ -1.85
HMGB1P23-201ENST00000518743 A0A0B4J2A0 478 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 MDFIC2A0A1B0GVS7 189 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 LYNX1G3V0Z9 82 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 GOLGA8MH3BSY2 632 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF701M0R085 212 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 PSMD12O00232 456 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 CT62P0C5K7 136 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 LYNX1P0DP58 116 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ATP6V1B2P21281 511 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 FASP25445 335 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 CMPK1P30085 196 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 PRLHRP49683 370 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 MEOX2P50222 304 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ETV1P50549 477 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 BTG2P78543 158 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF45Q02386 682 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 HERPUD1Q15011 391 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 KIAA0040Q15053 153 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 TCTEX1D4Q5JR98 221 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF620Q6ZNG0 422 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 LINC00523Q86TU6 105 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 COMTD1Q86VU5 262 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF677Q86XU0 584 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 TMEM252Q8N6L7 170 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR5T3Q8NGG3 340 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR6K3Q8NGY3 331 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR2L8Q8NGY9 312 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 MARCH1Q8TCQ1 289 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 CHCHD10Q8WYQ3 142 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 RILPQ96NA2 401 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 OPALINQ96PE5 141 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ATOH8Q96SQ7 321 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 SH3GL3Q99963 347 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 POLR2J2Q9GZM3 115 aaKnown RBP3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 POLR2J3Q9H1A7 115 aaKnown RBP3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 SLC25A22Q9H936 323 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF702PQ9H963 129 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 SHPKQ9UHJ6 478 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 KIF25Q9UIL4 384 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 UGT2A1Q9Y4X1 527 aa3.46□□□□□ -1.86
HMGB1P23-201ENST00000518743 A0A1W2PRD5 423 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 A6NIZ1 184 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 C12orf71A8MTZ7 269 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 H3BQV1 296 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 K7N7A8 449 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 M0R1B8 84 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 M0R3G1 203 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 MRPS12O15235 138 aaKnown RBP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 AKR7A2O43488 359 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 EIF3GO75821 320 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 IGHV3-48P01763 117 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 RPN2P04844 631 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 IFNA16P05015 189 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 UBTFL6P0CB48 400 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 AQP1P29972 269 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 RPS5P46782 204 aaKnown RBP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 GSSP48637 474 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 KLK7P49862 253 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF83P51522 516 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 RAP1BP61224 184 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 SLC35A2P78381 396 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 PON3Q15166 354 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 C1orf100Q5SVJ3 147 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 UTF1Q5T230 341 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 CGB2Q6NT52 195 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 GSG1LQ6UXU4 331 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 H2AFVQ71UI9 128 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF786Q8N393 782 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 KLHL30-AS1Q8NEE0 82 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR9G4Q8NGQ1 327 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 FNDC9Q8TBE3 224 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 MITD1Q8WV92 249 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms