RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 KCNJ11Q14654 390 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 LTB4RQ15722 352 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 GABRA6Q16445 453 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 NHLRC3Q5JS37 347 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 TMEM53Q6P2H8 277 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 SASS6Q6UVJ0 657 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 FAM151BQ6UXP7 276 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 ACP7Q6ZNF0 438 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 C18orf65Q6ZTR6 163 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 CENPQQ7L2Z9 268 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 GALNT10Q86SR1 603 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PLCZ1Q86YW0 608 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 NELFCDQ8IXH7 590 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 C9orf40Q8IXQ3 194 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 FBXL16Q8N461 479 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 KLHL30-AS1Q8NEE0 82 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 OR52K1Q8NGK4 314 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 OR5M1Q8NGP8 315 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 OR56B4Q8NH76 319 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 OR10D3Q8NH80 312 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 UBALD1Q8TB05 177 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 CCL17Q92583 94 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 EFHD2Q96C19 240 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 DNAJC19Q96DA6 116 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 DCUN1D1Q96GG9 259 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PRRC1Q96M27 445 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 C9orf85Q96MD7 179 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 TSNARE1Q96NA8 513 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 MBOAT4Q96T53 435 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 MCHR1Q99705 422 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 OSBPL11Q9BXB4 747 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 MRPL37Q9BZE1 423 aaKnown RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 ALX4Q9H161 411 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 JPT2Q9H910 190 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 NHEJ1Q9H9Q4 299 aaPredicted RBP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 SIRT7Q9NRC8 400 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 RBM22Q9NW64 420 aaKnown RBP eCLIP2.33□□□□□ -2.04
CPNE3-204ENST00000517862 DHRS4-AS1Q9P1J3 65 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PHF11Q9UIL8 331 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 TBC1D24Q9ULP9 559 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 MMACHCQ9Y4U1 282 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 PEX16Q9Y5Y5 336 aa2.33□□□□□ -2.04
CPNE3-204ENST00000517862 IGKV1-8A0A0C4DH67 115 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 FAM25EA8MYX2 175 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 HSD17B6O14756 317 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 PPP1R2P9O14990 202 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 GALR3O60755 368 aaPredicted RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF254O75437 659 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 CNIH1O95406 144 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 P0DMU3 169 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 FAM231AP0DMU4 169 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 FAM231CP0DMU5 169 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 CT45A10P0DMU9 189 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 LAMP1P11279 417 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 RNH1P13489 461 aaKnown RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 SLC6A1P30531 599 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 CALCRP30988 508 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 ELK3P41970 407 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 RGS8P57771 180 aaPredicted RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 PRPS1P60891 318 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 SKP1P63208 163 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 TNFRSF9Q07011 255 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 TRIP13Q15645 432 aaPredicted RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 DEFB134Q4QY38 66 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 C2CD6Q53TS8 623 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF506Q5JVG8 444 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 DCST2Q5T1A1 773 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 OR5M10Q6IEU7 315 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 OR52E8Q6IFG1 317 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 CCDC137Q6PK04 289 aaKnown RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 TCF24Q7RTU0 167 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 OR2W3Q7Z3T1 314 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 LYG2Q86SG7 212 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF429Q86V71 674 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 C12orf56Q8IXR9 622 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 COMMD1Q8N668 190 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 ACOT4Q8N9L9 421 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 OR4F6Q8NGB9 312 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 ZNF721Q8TF20 911 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 NPRL2Q8WTW4 380 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 IL1F10Q8WWZ1 152 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 UFD1Q92890 307 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 SLC38A4Q969I6 547 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 HAVCR1Q96D42 359 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 CNN2Q99439 309 aaKnown RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 RNF167Q9H6Y7 350 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 AMBNQ9NP70 447 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 PRTFDC1Q9NRG1 225 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 MRPL22Q9NWU5 206 aaKnown RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 THUMPD1Q9NXG2 353 aaKnown RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 PAQR5Q9NXK6 330 aaPredicted RBP2.32□□□□□ -2.04
CPNE3-204ENST00000517862 SLC22A7Q9Y694 548 aa2.32□□□□□ -2.04
CPNE3-204ENST00000517862 TRAV25A0A0B4J276 109 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 GLYATL1P3A0A0U1RQE8 302 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 GOSR2O14653 212 aa2.31□□□□□ -2.04
CPNE3-204ENST00000517862 UGT2B17O75795 530 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms