RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 C17orf67Q0P5P2 114 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 CHAF1BQ13112 559 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 TMEM176BQ3YBM2 270 aaPredicted RBP10.79□□□□□ -0.68
PCM1-203ENST00000517545 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
PCM1-203ENST00000517545 SPSB3Q6PJ21 355 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 SLC25A47Q6Q0C1 308 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 ZNF610Q8N9Z0 462 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 LMX1AQ8TE12 382 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 PARPBPQ9NWS1 579 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 AK3Q9UIJ7 227 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 LIPGQ9Y5X9 500 aa10.79□□□□□ -0.68
PCM1-203ENST00000517545 A0A1B0GV90 55 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 FAM24AA6NFZ4 105 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 HSD17B6O14756 317 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 HEXBP07686 556 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 OMGP23515 440 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 ECI1P42126 302 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 ALDH3B1P43353 468 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 SLC16A14Q7RTX9 510 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 CPEB2Q7Z5Q1 589 aaKnown RBP10.78□□□□□ -0.68
PCM1-203ENST00000517545 OR2G3Q8NGZ4 309 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 GALNT14Q96FL9 552 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 BRWD1Q9NSI6 2320 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 FER1L5A0AVI2 2057 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 ST8SIA3O43173 380 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 ATP6V0CP27449 155 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 AFF3P51826 1226 aaKnown RBP10.78□□□□□ -0.68
PCM1-203ENST00000517545 UBE2KP61086 200 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 DLK1P80370 383 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 EWSR1Q01844 656 aaKnown RBP eCLIP10.78□□□□□ -0.68
PCM1-203ENST00000517545 HIKESHIQ53FT3 197 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 LRRC18Q8N456 261 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 DEFB119Q8N690 84 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 SUMF1Q8NBK3 374 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 NAXEQ8NCW5 288 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 PHOSPHO2Q8TCD6 241 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 MSI2Q96DH6 328 aaKnown RBP10.78□□□□□ -0.68
PCM1-203ENST00000517545 KLHDC7BQ96G42 594 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 C18orf12Q96KH6 178 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 SLC2A9Q9NRM0 540 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 PIGLQ9Y2B2 252 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 TRGC2P03986 189 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 DBHP09172 617 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 MEX3BQ6ZN04 569 aaKnown RBP10.78□□□□□ -0.68
PCM1-203ENST00000517545 LIAT1Q6ZQX7 453 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 Q96M66 194 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 OPA3Q9H6K4 179 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 PIAS3Q9Y6X2 628 aa10.78□□□□□ -0.68
PCM1-203ENST00000517545 ATG2AQ2TAZ0 1938 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.68
PCM1-203ENST00000517545 ONECUT2O95948 504 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 DUSP1P28562 367 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 BLKP51451 505 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 DEFB133Q30KQ1 61 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 KIAA0895LQ68EN5 471 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 POC1BQ8TC44 478 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 HAS2Q92819 552 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 S100PBPQ96BU1 408 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 ZNF700Q9H0M5 742 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 ZNF160Q9HCG1 818 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 GPR27Q9NS67 375 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 HSF4Q9ULV5 492 aa10.77□□□□□ -0.68
PCM1-203ENST00000517545 A0A1B0GW64 132 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 OR5H15A6NDH6 313 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 GAMTQ14353 236 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 SHHQ15465 462 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 TMEM171Q8WVE6 324 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 RLN3Q8WXF3 142 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 BOD1Q96IK1 185 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 GPR173Q9NS66 373 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 PISDQ9UG56 409 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 SDK1Q7Z5N4 2213 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 IGSF23A1L1A6 192 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 SLC33A1O00400 549 aaPredicted RBP10.77□□□□□ -0.69
PCM1-203ENST00000517545 CYB5BO43169 146 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 PHF1O43189 567 aaPredicted RBP10.77□□□□□ -0.69
PCM1-203ENST00000517545 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.69
PCM1-203ENST00000517545 SFTPDP35247 375 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 RGS19P49795 217 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 IL13RA2Q14627 380 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 KHDC3LQ587J8 217 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 CCDC54Q8NEL0 328 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 MEGF10Q96KG7 1140 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 KLRF1Q9NZS2 232 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 RALGAPA1Q6GYQ0 2036 aa10.77□□□□□ -0.69
PCM1-203ENST00000517545 UNC13CQ8NB66 2214 aa10.76□□□□□ -0.69
PCM1-203ENST00000517545 LILRA5A6NI73 299 aa10.76□□□□□ -0.69
PCM1-203ENST00000517545 ZNF724A8MTY0 619 aa10.76□□□□□ -0.69
PCM1-203ENST00000517545 DHRS3O75911 302 aa10.76□□□□□ -0.69
PCM1-203ENST00000517545 FOLR1P15328 257 aa10.76□□□□□ -0.69
PCM1-203ENST00000517545 HIST1H1BP16401 226 aaKnown RBP10.76□□□□□ -0.69
PCM1-203ENST00000517545 GRB2P62993 217 aaKnown RBP10.76□□□□□ -0.69
PCM1-203ENST00000517545 ZNF429Q86V71 674 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms