RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 IGHV2OR16-5A0A0B4J2B6 119 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 TMEM150BA6NC51 233 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 GOLGA8IPA6NC78 632 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 H7C1H1 209 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 H7C417 338 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 M0R1B8 84 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 KMOO15229 486 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 SLC37A4O43826 429 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RDH16O75452 317 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 BRI3O95415 125 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 EIF4EP06730 217 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 GP1BAP07359 652 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 GNAO1P09471 354 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 GIPP09681 153 aaPredicted RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 SLC35G6P0C7Q6 338 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 GIMD1P0DJR0 217 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 THRAP10827 490 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 TCP1P17987 556 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 RCC1P18754 421 aaPredicted RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 RAB3AP20336 220 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 HTR1DP28221 377 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 MYCNOSP40205 109 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RBM34P42696 430 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 MAGEA6P43360 314 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 XKP51811 444 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 ZNF138P52744 262 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 PLTPP55058 493 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 HERVK_113P61574 105 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 SLC35A1P78382 337 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 DMC1Q14565 340 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 PON2Q15165 354 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 GUCA2BQ16661 112 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 FAM27D1Q5T7N8 215 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 THOC7Q6I9Y2 204 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 TPGS1Q6ZTW0 290 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 LINC00173Q6ZV60 143 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 COX15Q7KZN9 410 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 CAMK2N1Q7Z7J9 78 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 SLC30A8Q8IWU4 369 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 NELFCDQ8IXH7 590 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 TMEM86AQ8N2M4 240 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 FAM71E2Q8N5Q1 922 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RNF10Q8N5U6 811 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 UBAC2Q8NBM4 344 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 ACBD4Q8NC06 268 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 NPBQ8NG41 125 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 UBA3Q8TBC4 463 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 ING5Q8WYH8 240 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RPUSD4Q96CM3 377 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 OTUB2Q96DC9 234 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RNF185Q96GF1 192 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 ADTRPQ96IZ2 230 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RNF145Q96MT1 663 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 RASL11BQ9BPW5 248 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 PDCD1LG2Q9BQ51 273 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 C7orf50Q9BRJ6 194 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 PLA2G2FQ9BZM2 168 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 CLMPQ9H6B4 373 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 ZNF442Q9H7R0 627 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 TMBIM4Q9HC24 238 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 SLC25A37Q9NYZ2 338 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 UVRAGQ9P2Y5 699 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 MTFP1Q9UDX5 166 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 PPIL1Q9Y3C6 166 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 F11RQ9Y624 299 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 MRPS18BQ9Y676 258 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 CDK5RAP2Q96SN8 1893 aa2.15□□□□□ -2.07
HERC4-215ENST00000515753 SPTBN5Q9NRC6 3674 aaKnown RBP2.15□□□□□ -2.07
HERC4-215ENST00000515753 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 VCANP13611 3396 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 TANC1Q9C0D5 1861 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 FABP12A6NFH5 140 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 I3L4J1 428 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 PIRO00625 290 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 TOX3O15405 576 aaPredicted RBP2.14□□□□□ -2.07
HERC4-215ENST00000515753 RAD1O60671 282 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 AHSA1O95433 338 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 CD8AP01732 235 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 APODP05090 189 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 CRISP2P16562 243 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 ZNF30P17039 623 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 HTR1EP28566 365 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 CEACAM6P40199 344 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 P2RX1P51575 399 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 NCBP2P52298 156 aaKnown RBP eCLIP2.14□□□□□ -2.07
HERC4-215ENST00000515753 SYNJ2BPP57105 145 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 OR12D2P58182 307 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 RPS23P62266 143 aaKnown RBP2.14□□□□□ -2.07
HERC4-215ENST00000515753 SNRPFP62306 86 aaKnown RBP2.14□□□□□ -2.07
HERC4-215ENST00000515753 SLC7A9P82251 487 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 HMGCS1Q01581 520 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 STX4Q12846 297 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 MED21Q13503 144 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 TPBGQ13641 420 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 FLOT2Q14254 428 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 GUSBP1Q15486 140 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 OR1Q1Q15612 314 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 TOMM34Q15785 309 aaPredicted RBP2.14□□□□□ -2.07
HERC4-215ENST00000515753 TMEM249Q2WGJ8 235 aa2.14□□□□□ -2.07
HERC4-215ENST00000515753 ZNF544Q6NX49 715 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms