RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CYC1P08574 325 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 POLR2GP62487 172 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCOF1-214ENST00000515035 IL24Q13007 206 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 FGF14Q92915 247 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 PITPNC1Q9UKF7 332 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 H3BMH7 237 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 CTGFP29279 349 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 ZXDAP98168 799 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 CCL4L1Q8NHW4 92 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-214ENST00000515035 SRD5A3Q9H8P0 318 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 FUT9Q9Y231 359 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 MFNGO00587 321 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 HLA-DRB5Q30154 266 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 SMIM21Q3B7S5 101 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 THOC3Q96J01 351 aaKnown RBP11.85□□□□□ -0.51
TCOF1-214ENST00000515035 PCED1AQ9H1Q7 454 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 SIRT7Q9NRC8 400 aa11.85□□□□□ -0.51
TCOF1-214ENST00000515035 ELF5Q9UKW6 265 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-214ENST00000515035 K7ERU9 68 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 SLC25A5P05141 298 aaKnown RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 RHOBP62745 196 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 FMODQ06828 376 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 JMJD6Q6NYC1 403 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ZNF880Q6PDB4 577 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 C6orf15Q6UXA7 325 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 THSD4Q6ZMP0 1018 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 LIAT1Q6ZQX7 453 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ZADH2Q8N4Q0 377 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 OR5D13Q8NGL4 314 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 LINC00615Q96LM1 132 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 PAM16Q9Y3D7 125 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 LRRC3CA6NJW4 275 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 CCR2P41597 374 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 DMKNQ6E0U4 476 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 CLEC18BQ6UXF7 455 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 OR10G8Q8NGN5 311 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 OR1L4Q8NGR5 311 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ADAT1Q9BUB4 502 aaKnown RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 PLRG1O43660 514 aaKnown RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 HLA-GP17693 338 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 LPAR6P43657 344 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 IFITM3Q01628 133 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ZNF79Q15937 498 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 CEACAM16Q2WEN9 425 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 FAM109BQ6ICB4 259 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 DEGS2Q6QHC5 323 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ZG16BQ96DA0 208 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 PLPPR2Q96GM1 343 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 IP6K3Q96PC2 410 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ESRP2Q9H6T0 727 aaKnown RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 CRYAAP02489 173 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 FAM53BQ14153 422 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 ETV3LQ6ZN32 361 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 OR4D9Q8NGE8 314 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 CNTD2Q9H8S5 307 aa11.84□□□□□ -0.51
TCOF1-214ENST00000515035 MRPS2Q9Y399 296 aaKnown RBP11.84□□□□□ -0.51
TCOF1-214ENST00000515035 CXorf51AA0A1B0GTR3 108 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 CDC14BO60729 498 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.51
TCOF1-214ENST00000515035 UBE2V2Q15819 145 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM196Q5HYL7 178 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 TMEM251Q8N6I4 163 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 OR1F12Q8NHA8 337 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 AAMDCQ9H7C9 122 aa11.83□□□□□ -0.51
TCOF1-214ENST00000515035 OR2W5A6NFC9 320 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 SHISA7A6NL88 538 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 H3BQ15 152 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 C1QAP02745 245 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 APOBEC3DQ96AK3 386 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-214ENST00000515035 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 PLAC1Q9HBJ0 212 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF275Q9NSD4 429 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-214ENST00000515035 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 DYNLT3P51808 116 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
TCOF1-214ENST00000515035 OCIAD1Q9NX40 245 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 WNT16Q9UBV4 365 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 ICAM5Q9UMF0 924 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 SSC5DA1L4H1 1573 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 TNFSF11O14788 317 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 CSN3P07498 182 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 OR3A4PP47883 348 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 P2RY1P47900 373 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 COX19Q49B96 90 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 OR10V1Q8NGI7 309 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 KCNE4Q8WWG9 221 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 PCDHGA9Q9Y5G4 932 aaKnown RBP11.83□□□□□ -0.52
TCOF1-214ENST00000515035 NKX2-2O95096 273 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 CTSDP07339 412 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-214ENST00000515035 CEACAM6P40199 344 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 TCL1AP56279 114 aa11.83□□□□□ -0.52
TCOF1-214ENST00000515035 MPV17LQ2QL34 196 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms