RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 RASL12Q9NYN1 266 aa13.61□□□□□ -0.23
NUP54-214ENST00000514307 COPZ2Q9P299 210 aa13.61□□□□□ -0.23
NUP54-214ENST00000514307 RTTNQ86VV8 2226 aa13.61□□□□□ -0.23
NUP54-214ENST00000514307 A0A0A6YYD4 124 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 MEIOCA2RUB1 952 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 TMEM235A6NFC5 223 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 F5H5P2 479 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 MLNRO43193 412 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 SYNGR1O43759 233 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 KIR2DL3P43628 341 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 TAS2R19P59542 299 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 ZNF154Q13106 437 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 KLF9Q13886 244 aaPredicted RBP13.6□□□□□ -0.23
NUP54-214ENST00000514307 PCGF3Q3KNV8 242 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 CCBE1Q6UXH8 406 aaPredicted RBP13.6□□□□□ -0.23
NUP54-214ENST00000514307 NRARPQ7Z6K4 114 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 TRAPPC6BQ86SZ2 158 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 ITLN2Q8WWU7 325 aaPredicted RBP13.6□□□□□ -0.23
NUP54-214ENST00000514307 ERGIC1Q969X5 290 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 TLNRD1Q9H1K6 362 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 FN3KRPQ9HA64 309 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 IL19Q9UHD0 177 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 FBXO9Q9UK97 447 aaPredicted RBP13.6□□□□□ -0.23
NUP54-214ENST00000514307 RNF115Q9Y4L5 304 aa13.6□□□□□ -0.23
NUP54-214ENST00000514307 A6NLC8 198 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 FOXI3A8MTJ6 420 aaPredicted RBP13.59□□□□□ -0.23
NUP54-214ENST00000514307 SH2D1BO14796 132 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 GEMIN2O14893 280 aaKnown RBP13.59□□□□□ -0.23
NUP54-214ENST00000514307 ZG16O60844 167 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 PDCD6O75340 191 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 NXPH2O95156 264 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 AKAIN1P0CW23 69 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 PTHLHP12272 177 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 PRKACAP17612 351 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 RBM39Q14498 530 aaKnown RBP13.59□□□□□ -0.23
NUP54-214ENST00000514307 IL13RA2Q14627 380 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 ADIPOQQ15848 244 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 PLAC9Q5JTB6 97 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 PLET1Q6UQ28 207 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 OR10AD1Q8NGE0 317 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 OR10Z1Q8NGY1 313 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 EMG1Q92979 244 aaKnown RBP13.59□□□□□ -0.23
NUP54-214ENST00000514307 ELMOD3Q96FG2 381 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 DPAGT1Q9H3H5 408 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 MS4A5Q9H3V2 200 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 HRASLSQ9HDD0 168 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 POLEQ07864 2286 aa13.59□□□□□ -0.23
NUP54-214ENST00000514307 SPTA1P02549 2419 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.58□□□□□ -0.24
NUP54-214ENST00000514307 ZNF736B4DX44 427 aaPredicted RBP13.58□□□□□ -0.24
NUP54-214ENST00000514307 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 MFNGO00587 321 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 DEGS1O15121 323 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 SPRY3O43610 288 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 OR7C1O76099 320 aaPredicted RBP13.58□□□□□ -0.24
NUP54-214ENST00000514307 PTBP3O95758 552 aaKnown RBP13.58□□□□□ -0.24
NUP54-214ENST00000514307 PGA5P0DJD9 388 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 TBPP20226 339 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 CHATP28329 748 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 CFHR2P36980 270 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 RFX2P48378 723 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 ERVK11-1P61568 191 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 GUCA2AQ02747 115 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 TFF3Q07654 80 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 MAB21L1Q13394 359 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 TMEM255AQ5JRV8 349 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 NKAPLQ5M9Q1 402 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 ATAD3CQ5T2N8 411 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 POC1AQ8NBT0 407 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 FAM222BQ8WU58 562 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 ST8SIA4Q92187 359 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 NRIP2Q9BQI9 281 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 FAAP24Q9BTP7 215 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 EGLN1Q9GZT9 426 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 CHST6Q9GZX3 395 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 EDARQ9UNE0 448 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 PLEKHA6Q9Y2H5 1048 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 BOD1L1Q8NFC6 3051 aa13.58□□□□□ -0.24
NUP54-214ENST00000514307 WIPF3A6NGB9 483 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 POM121CA8CG34 1229 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 SHISA9B4DS77 424 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 B9A039 149 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 PYCARD-AS1I3L0S3 204 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 ADH4P08319 380 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 TNFRSF1AP19438 455 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 SLC6A1P30531 599 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 TNFAIP6P98066 277 aaPredicted RBP13.57□□□□□ -0.24
NUP54-214ENST00000514307 MEF2DQ14814 521 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 MSMPQ1L6U9 139 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 PIGYQ3MUY2 71 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 ACTBL2Q562R1 376 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 SPIN3Q5JUX0 258 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 ADAM5Q6NVV9 412 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 STEAP1BQ6NZ63 245 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 WDR86Q86TI4 376 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 C11orf53Q8IXP5 236 aa13.57□□□□□ -0.24
NUP54-214ENST00000514307 GCDHQ92947 438 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms