RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 OCM2P0CE71 109 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OCMP0CE72 109 aaPredicted RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR5H8P0DN80 308 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 IGHV1-8P0DP01 117 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 IGKV1-13P0DP09 117 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 GFAPP14136 432 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF823P16415 610 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 RCVRNP35243 200 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TGFBR1P36897 503 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 RBM34P42696 430 aaKnown RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 NSG1P42857 185 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MAP2K4P45985 399 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 HSPA13P48723 471 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 EIF2B2P49770 351 aaKnown RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 BCAP31P51572 246 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 NCBP2P52298 156 aaKnown RBP eCLIP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PRRX1P54821 245 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PRMT2P55345 433 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR4D2P58180 307 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MTPNP58546 118 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 DAOAP59103 153 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 DNAJB13P59910 316 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PPP1CBP62140 327 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ESRRGP62508 458 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 RPS15P62841 145 aaKnown RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CCNA1P78396 465 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 BEX3Q00994 111 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 RELAQ04206 551 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 LIPEQ05469 1076 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 STX5Q13190 355 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PPIL2Q13356 520 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 IHHQ14623 411 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SPCS2Q15005 226 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TRAM2Q15035 370 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MAPRE2Q15555 327 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR4D1Q15615 310 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 STK11Q15831 433 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZBTB6Q15916 424 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 FAM83EQ2M2I3 478 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CHRFAM7AQ494W8 412 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 LINC00483Q53H64 154 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PYCR3Q53H96 274 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 C5orf47Q569G3 176 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 YIF1BQ5BJH7 314 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 LY6G6FQ5SQ64 297 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF678Q5SXM1 525 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF691Q5VV52 312 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TMEM236Q5W0B7 351 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF470Q6ECI4 717 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 GLYATQ6IB77 296 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 FAM45BPQ6NSW5 357 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PRMT9Q6P2P2 845 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SLC25A34Q6PIV7 304 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 METAP1DQ6UB28 335 aaPredicted RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SPESP1Q6UW49 350 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ALKAL1Q6UXT8 129 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 C4orf22Q6V702 233 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 C12orf54Q6X4T0 127 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CYHR1Q6ZMK1 362 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TMPRSS11AQ6ZMR5 421 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 NEGR1Q7Z3B1 354 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MDP1Q86V88 176 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 UNC93AQ86WB7 457 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 RIMKLAQ8IXN7 391 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 KIR2DL5AQ8N109 375 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 LGI3Q8N145 548 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TMEM256Q8N2U0 113 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ATPAF2Q8N5M1 289 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MS4A15Q8N5U1 240 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 FAM86B1Q8N7N1 296 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 BPIFB6Q8NFQ5 453 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR11H7Q8NGC8 314 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR52K2Q8NGK3 314 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR13C4Q8NGS5 318 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR13G1Q8NGZ3 307 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 KIR2DL5BQ8NHK3 375 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 UBALD1Q8TB05 177 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 FAM45AQ8TCE6 357 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TWIST2Q8WVJ9 160 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TSEN15Q8WW01 171 aaKnown RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 DNAJB3Q8WWF6 145 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CAPSLQ8WWF8 208 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 BORCS5Q969J3 196 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SLC35B4Q969S0 331 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 LRRC58Q96CX6 371 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SEH1LQ96EE3 360 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 L3HYPDHQ96EM0 354 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 C19orf60Q96EN9 201 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TEX37Q96LM6 180 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PRRC1Q96M27 445 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 GLT1D1Q96MS3 346 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 RNF145Q96MT1 663 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 HBEGFQ99075 208 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 DOK1Q99704 481 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MTG1Q9BT17 334 aaPredicted RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 C9orf16Q9BUW7 83 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 KIFC1Q9BW19 673 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CHID1Q9BWS9 393 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CCDC90BQ9GZT6 254 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SPNS1Q9H2V7 528 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms