RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 Q96MT0 163 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 TBX5Q99593 518 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 SSX3Q99909 188 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 CDCA4Q9BXL8 241 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 TTTY10Q9BZA0 68 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 MMP27Q9H306 513 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 C19orf12Q9NSK7 152 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 OR14J1Q9UGF5 321 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 GNG8Q9UK08 70 aa5.96□□□□□ -1.46
HTT-212ENST00000513639 hADV38S2A0JD32 116 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 C17orf98A8MV24 154 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 M0R129 80 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 MPZL2O60487 215 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 TFF1P04155 84 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ISG15P05161 165 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ZNF728P0DKX0 622 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 PEX2P28328 305 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 GABRA5P31644 462 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 CCR9P51686 369 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 MTCP1P56278 107 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 COL10A1Q03692 680 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 CNN3Q15417 329 aaKnown RBP5.95□□□□□ -1.46
HTT-212ENST00000513639 UBE2V2Q15819 145 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ODF4Q2M2E3 257 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 LRRC75BQ2VPJ9 315 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 SLC35E4Q6ICL7 350 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 FDX2Q6P4F2 183 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ZBTB49Q6ZSB9 765 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 SLC25A26Q70HW3 274 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 UTS2BQ765I0 119 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ACBD7Q8N6N7 88 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ASCC1Q8N9N2 400 aaKnown RBP5.95□□□□□ -1.46
HTT-212ENST00000513639 OR4M1Q8NGD0 313 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 OR4C13Q8NGP0 309 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 OR2G2Q8NGZ5 317 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 UBE2FQ969M7 185 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 FGGYQ96C11 551 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 SNX22Q96L94 193 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 ZNF488Q96MN9 340 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 CHST5Q9GZS9 411 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 PPA2Q9H2U2 334 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 RHOFQ9HBH0 211 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 MTCH1Q9NZJ7 389 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 PITPNC1Q9UKF7 332 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 PCDHGB5Q9Y5G0 923 aa5.95□□□□□ -1.46
HTT-212ENST00000513639 FUOMA2VDF0 154 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 FAM90A8PA6NJQ4 464 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 SAC3D1A6NKF1 404 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 VGLL3A8MV65 326 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 H3BUX3 64 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 SH2D1BO14796 132 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 SLC16A6O15403 523 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ENTPD6O75354 484 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 FADS2O95864 444 aaKnown RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 ALPLP05186 524 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ZNF20P17024 532 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ALDH3A2P51648 485 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 OR12D2P58182 307 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ISL1P61371 349 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ACTA2P62736 377 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ACTG2P63267 376 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 PRB3Q04118 309 aaPredicted RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 SRSF4Q08170 494 aaKnown RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 MRPL28Q13084 256 aaKnown RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 KLRD1Q13241 179 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ZNF146Q15072 292 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 SPIN3Q5JUX0 258 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ASPHD2Q6ICH7 369 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 HCP5Q6MZN7 132 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 Q6ZTK2 550 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 CCDC121Q6ZUS5 278 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 LHFPL2Q6ZUX7 228 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 SSX6Q7RTT6 188 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 RDH10Q8IZV5 341 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 OR8H2Q8N162 312 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 FAM58AQ8N1B3 248 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 PRSS35Q8N3Z0 413 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 PNKDQ8N490 385 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 C11orf42Q8N5U0 333 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 OR11H6Q8NGC7 330 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 OR5D14Q8NGL3 314 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 OR2T6Q8NHC8 308 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 TRMT10AQ8TBZ6 339 aaKnown RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 HAVCR2Q8TDQ0 301 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 PYDC1Q8WXC3 89 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 SPSB1Q96BD6 273 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 FOXRED1Q96CU9 486 aaPredicted RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 RNFT2Q96EX2 444 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 NPFFR1Q9GZQ6 430 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 ELL3Q9HB65 397 aaPredicted RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 ABCB10Q9NRK6 738 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 FRRS1LQ9P0K9 344 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 HHLA2Q9UM44 414 aa5.94□□□□□ -1.46
HTT-212ENST00000513639 TBL2Q9Y4P3 447 aaKnown RBP5.94□□□□□ -1.46
HTT-212ENST00000513639 NOTCH3Q9UM47 2321 aa5.93□□□□□ -1.46
HTT-212ENST00000513639 LOC107986453A0A1B0GWG9 222 aa5.93□□□□□ -1.46
HTT-212ENST00000513639 J3QLW9 94 aa5.93□□□□□ -1.46
HTT-212ENST00000513639 J3QRE1 110 aa5.93□□□□□ -1.46
HTT-212ENST00000513639 MGST3O14880 152 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms