RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 OR5M11Q96RB7 305 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 RAB40CQ96S21 281 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 DCTN5Q9BTE1 182 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 POFUT1Q9H488 388 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ASB1Q9Y576 335 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 YTHDF2Q9Y5A9 579 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZNF831Q5JPB2 1677 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 RREB1Q92766 1687 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZC3H12DA2A288 527 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 LEUTXA8MZ59 168 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 JUNBP17275 347 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 FGF7P21781 194 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 POLR2IP36954 125 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 UCP2P55851 309 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 GUCA2BQ16661 112 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FAM106AQ4KMX7 169 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 CXorf66Q5JRM2 361 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 C20orf196Q8IYI0 205 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 LSMEM1Q8N8F7 131 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 HSD17B11Q8NBQ5 300 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZNRF4Q8WWF5 429 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MAP6Q96JE9 813 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZNF552Q9H707 407 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 TMED3Q9Y3Q3 217 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 LOC105371242A0A075B767 164 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 TMEM235A6NFC5 223 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 OR2T8A6NH00 312 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 HIST1H1EP10412 219 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 COMPP49747 757 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 C4orf17Q53FE4 359 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 SLC16A12Q6ZSM3 486 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZNF714Q96N38 554 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MYH7P12883 1935 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 CTDSP2O14595 271 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 RAB5CP51148 216 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 PMP22Q01453 160 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FMODQ06828 376 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ENDOGQ14249 297 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 SSX1Q16384 188 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 HIKESHIQ53FT3 197 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 NCR3LG1Q68D85 454 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 OR10K2Q6IF99 312 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FAM122CQ6P4D5 195 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 THSD4Q6ZMP0 1018 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 SLC22A18ASQ8N1D0 253 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 STPG3Q8N7X2 389 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 LHX4Q969G2 390 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 YIPF5Q969M3 257 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ZNF275Q9NSD4 429 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 UQCC1Q9NVA1 299 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FBXL2Q9UKC9 423 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ABCA3Q99758 1704 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 SHANK3Q9BYB0 1731 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MYH10P35580 1976 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 A0A1B0GUL6 1792 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FADS1O60427 444 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 GPX5O75715 221 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 COX5BP10606 129 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 SELENOPP49908 381 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 DESI1Q6ICB0 168 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MUC15Q8N387 334 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 SFT2D1Q8WV19 159 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 METRNQ9UJH8 293 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MYH14Q7Z406 1995 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 A0A0J9YW62 118 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 F5H697 171 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 J3QW42 95 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 WNT9BO14905 357 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 SSSCA1O60232 199 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 GALP22466 123 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 LSAMPQ13449 338 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 LINC00299Q6ZSB3 139 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 RIMKLAQ8IXN7 391 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 AMER3Q8N944 861 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FDCSPQ8NFU4 85 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 OR1L8Q8NGR8 309 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 ABHD17AQ96GS6 310 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 METTL17Q9H7H0 456 aaPredicted RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 RASL12Q9NYN1 266 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 CLEC2DQ9UHP7 191 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 NEUROG3Q9Y4Z2 214 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 TRDCB7Z8K6 153 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 AKR7A2O43488 359 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 XRCC3O43542 346 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 HIST1H1DP16402 221 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 RPS27P42677 84 aaKnown RBP3.74□□□□□ -1.81
VCAN-209ENST00000513016 PSG6Q00889 435 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 MMDQ15546 238 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 PLPPR5Q32ZL2 321 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 RIPPLY2Q5TAB7 128 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 TSPO2Q5TGU0 170 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FAM222BQ8WU58 562 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 NUDCD2Q8WVJ2 157 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 FAM168AQ92567 244 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 NTNG2Q96CW9 530 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 TAF9BQ9HBM6 251 aa3.74□□□□□ -1.81
VCAN-209ENST00000513016 A0A1W2PQM1 296 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 OR2F2O95006 317 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 FUCA1P04066 466 aa3.73□□□□□ -1.81
VCAN-209ENST00000513016 SPINK2P20155 84 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms