RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 TBC1D21Q8IYX1 336 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 SLC7A5P1Q8MH63 180 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 MUC15Q8N387 334 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 TCAIMQ8N3R3 496 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 JAGN1Q8N5M9 183 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 LINC00337Q8N6G1 96 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 TEX9Q8N6V9 391 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 OR52E5Q8NH55 327 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 FAM81AQ8TBF8 368 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 DCANP1Q8TF63 244 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 CA5BP1Q8WTZ4 195 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 DDIT4LQ96D03 193 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 B9D2Q9BPU9 175 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF251Q9BRH9 671 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 SPZ1Q9BXG8 430 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 PORCNQ9H237 461 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ARV1Q9H2C2 271 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 REEP1Q9H902 201 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF160Q9HCG1 818 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 RBM22Q9NW64 420 aaKnown RBP eCLIP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 LYARQ9NX58 379 aaKnown RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ADA2Q9NZK5 511 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 ASB3Q9Y575 518 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 SAR1BQ9Y6B6 198 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 USP24Q9UPU5 2620 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 DIDO1Q9BTC0 2240 aaKnown RBP0.19□□□□□ -2.38
PDGFC-208ENST00000512711 CRB1P82279 1406 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 NINLQ9Y2I6 1382 aa0.19□□□□□ -2.38
PDGFC-208ENST00000512711 PXDNLA1KZ92 1463 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 ZNF638Q14966 1978 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 A0A075B6Q4 140 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 TRGV2A0A075B6R0 118 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 IGHV3-43A0A0B4J1X8 118 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 A0A0B4J2E0 115 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 A0A0J9YYE9 177 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 A0A1W2PRG6 482 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 BICDL2A1A5D9 508 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 GOLGA8OA6NCC3 632 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 ODF3BA8MYP8 253 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 F8VP50 259 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 GOLGA8NF8WBI6 632 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 J3QT63 122 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 K7EPK0 472 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 MPHOSPH10O00566 681 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 EEF1E1O43324 174 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 TRAPPC3O43617 180 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 FCN3O75636 299 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 OR2F2O95006 317 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 SMC2O95347 1197 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 ETHE1O95571 254 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 TTC4O95801 387 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 NAPSAO96009 420 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 TRBC1P01850 177 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 HLA-HP01893 362 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 CATP04040 527 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 GTF2F2P13984 249 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 CPMP14384 443 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 PAX6P26367 422 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 STOMP27105 288 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 IMPA1P29218 277 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 ARL2P36404 184 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 MAGEA1P43355 309 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 C21orf59P57076 290 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 RPS15P62841 145 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 SLC35A1P78382 337 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 SSX1Q16384 188 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 SPIN4Q56A73 249 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 UBE2NLQ5JXB2 153 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 ANGPTL8Q6UXH0 198 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 CLEC19AQ6UXS0 136 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 VTCN1Q7Z7D3 282 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 DPPA2Q7Z7J5 298 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 LINC00596Q86U02 117 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 CYP4Z2PQ8N1L4 340 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 KIF2BQ8N4N8 673 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 CCNYL1Q8N7R7 359 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 OR4K2Q8NGD2 314 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 C22orf15Q8WYQ4 148 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 NRGNQ92686 78 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 C8orf44Q96CB5 159 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 RASD2Q96D21 266 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 TPD52L3Q96J77 140 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 SMIM8Q96KF7 97 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 DNAJC30Q96LL9 226 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 PANX1Q96RD7 426 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 GABRG3Q99928 467 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 RETNLBQ9BQ08 111 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 NAA38Q9BRA0 125 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 AGMATQ9BSE5 352 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 FAM192AQ9GZU8 254 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 NT5C3AQ9H0P0 336 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 MFSD1Q9H3U5 465 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 COX16Q9P0S2 106 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 MYEF2Q9P2K5 600 aaKnown RBP0.18□□□□□ -2.38
PDGFC-208ENST00000512711 PRO0628Q9UI54 55 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 ORC6Q9Y5N6 252 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 OR51B2Q9Y5P1 312 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 FADS3Q9Y5Q0 445 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 INSIG2Q9Y5U4 225 aa0.18□□□□□ -2.38
PDGFC-208ENST00000512711 CEP170Q5SW79 1584 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms