RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 VN1R4Q7Z5H5 301 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 FBXO17Q96EF6 278 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 PECRQ9BY49 303 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 HES7Q9BYE0 225 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 SLC25A22Q9H936 323 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 TMEM9BQ9NQ34 198 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 FER1L6Q2WGJ9 1857 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 SHROOM3Q8TF72 1996 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 SLX4Q8IY92 1834 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 SNCGO76070 127 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 MPZL1O95297 269 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 HOXB3P14651 431 aaPredicted RBP9.41□□□□□ -0.9
NEK1-206ENST00000510533 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 PMS2P11Q13670 270 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 ZIC1Q15915 447 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 PWWP2BQ6NUJ5 590 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 OR13G1Q8NGZ3 307 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 OR2D2Q9H210 308 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
NEK1-206ENST00000510533 CT62P0C5K7 136 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 BMP5P22003 454 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 TRA2AQ13595 282 aaKnown RBP eCLIP9.41□□□□□ -0.9
NEK1-206ENST00000510533 IL11RAQ14626 422 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 CBLN3Q6UW01 205 aa9.41□□□□□ -0.9
NEK1-206ENST00000510533 RBFOX3A6NFN3 312 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 NCBP2LA6PVI3 153 aaKnown RBP9.4□□□□□ -0.9
NEK1-206ENST00000510533 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
NEK1-206ENST00000510533 ADAP1O75689 374 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 SPCS3P61009 180 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 SURF2Q15527 256 aaPredicted RBP9.4□□□□□ -0.9
NEK1-206ENST00000510533 Q56UQ5 140 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 CADM4Q8NFZ8 388 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 GPBAR1Q8TDU6 330 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 OIT3Q8WWZ8 545 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 LINC00052Q96N35 136 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 P4HTMQ9NXG6 502 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 FKBP11Q9NYL4 201 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 DUXBA0A1W2PPF3 345 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 HOXC4P09017 264 aaPredicted RBP9.4□□□□□ -0.9
NEK1-206ENST00000510533 NHLH1Q02575 133 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 NHLH2Q02577 135 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 PRO1933Q9H354 126 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 CACNA1CQ13936 2221 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 CRYABP02511 175 aaKnown RBP9.4□□□□□ -0.9
NEK1-206ENST00000510533 MEOX2P50222 304 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 FGF8P55075 233 aaPredicted RBP9.4□□□□□ -0.9
NEK1-206ENST00000510533 ZNF154Q13106 437 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 ZNF766Q5HY98 468 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 FAM78BQ5VT40 261 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 ZNF547Q8IVP9 402 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 OR10D3Q8NH80 312 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 KCNK15Q9H427 330 aa9.4□□□□□ -0.9
NEK1-206ENST00000510533 TRAV17A0A0B4J275 112 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 SCGB1C2P0DMR2 95 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 P2RY1P47900 373 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 WDR73Q6P4I2 378 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 BTNL3Q6UXE8 466 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 BVESQ8NE79 360 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 ZNF764Q96H86 408 aaPredicted RBP9.4□□□□□ -0.91
NEK1-206ENST00000510533 LRP5O75197 1615 aa9.4□□□□□ -0.91
NEK1-206ENST00000510533 IGHV1OR21-1A0A087WYE8 117 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 A0A1W2PR80 420 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 LEUTXA8MZ59 168 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 PNRC1Q12796 327 aaPredicted RBP9.39□□□□□ -0.91
NEK1-206ENST00000510533 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 NUFIP2Q7Z417 695 aaKnown RBP9.39□□□□□ -0.91
NEK1-206ENST00000510533 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 BTAF1O14981 1849 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 AP4M1O00189 453 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 OPN1MWP04001 364 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 OPN1MW2P0DN77 364 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 OPN1MW3P0DN78 364 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 GABRA1P14867 456 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 POLR2GP62487 172 aaKnown RBP eCLIP9.39□□□□□ -0.91
NEK1-206ENST00000510533 CLEC18BQ6UXF7 455 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 ASB10Q8WXI3 467 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 Q9N2K0 584 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 TAF1P21675 1872 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 OR5B21A6NL26 309 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 MEOX1P50221 254 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 ZNF83P51522 516 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 FNDC7Q5VTL7 733 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 LILRA6Q6PI73 481 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 OR6X1Q8NH79 312 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 PRSS3P2Q8NHM4 247 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 RPS4Y2Q8TD47 263 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 ZFP64Q9NPA5 681 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 NAT8Q9UHE5 227 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 MBPP02686 304 aaPredicted RBP9.39□□□□□ -0.91
NEK1-206ENST00000510533 CRHP06850 196 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 HTR1DP28221 377 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 RPL29P47914 159 aaKnown RBP9.39□□□□□ -0.91
NEK1-206ENST00000510533 DYNLT3P51808 116 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 AWAT1Q58HT5 328 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 SPINK9Q5DT21 86 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms