RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ERVK11-1P61568 191 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 C1orf146Q5VVC0 180 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 CCDC54Q8NEL0 328 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 CIB1Q99828 191 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 RANBP3Q9H6Z4 567 aaPredicted RBP12.47□□□□□ -0.41
TPM3-219ENST00000509409 MTCH1Q9NZJ7 389 aa12.47□□□□□ -0.41
TPM3-219ENST00000509409 F8VVB4 439 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 F8VWA3 439 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 SULT1C4O75897 302 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 CYB5AP00167 134 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 FCGR1AP12314 374 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 POLR2IP36954 125 aaKnown RBP12.46□□□□□ -0.41
TPM3-219ENST00000509409 BNIP1Q12981 228 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 EDDM3AQ14507 147 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 SSX2Q16385 188 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 SLC25A26Q70HW3 274 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 FAM220AQ7Z4H9 259 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.41
TPM3-219ENST00000509409 FOXRED1Q96CU9 486 aaPredicted RBP12.46□□□□□ -0.41
TPM3-219ENST00000509409 MALSU1Q96EH3 234 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 SNX22Q96L94 193 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 GABARAPL1Q9H0R8 117 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 GNG8Q9UK08 70 aa12.46□□□□□ -0.41
TPM3-219ENST00000509409 TBL2Q9Y4P3 447 aaKnown RBP12.46□□□□□ -0.41
TPM3-219ENST00000509409 TGP01266 2768 aa12.46□□□□□ -0.42
TPM3-219ENST00000509409 NOTCH1P46531 2555 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 IGKV1-27A0A075B6S5 117 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 hADV38S2A0JD32 116 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 FAM90A8PA6NJQ4 464 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 CHST1O43916 411 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 GABRR1P24046 479 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 PEX2P28328 305 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 ATP1B3P54709 279 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 DLX6P56179 175 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 OR12D2P58182 307 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 CNN3Q15417 329 aaKnown RBP12.45□□□□□ -0.42
TPM3-219ENST00000509409 NSUN5P1Q3KNT7 163 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 ARSJQ5FYB0 599 aaPredicted RBP12.45□□□□□ -0.42
TPM3-219ENST00000509409 RDH10Q8IZV5 341 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 DYNAPQ8N1N2 210 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 OR8J1Q8NGP2 316 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 RPS4Y2Q8TD47 263 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 RFKQ969G6 155 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 PITPNC1Q9UKF7 332 aa12.45□□□□□ -0.42
TPM3-219ENST00000509409 A0A0G2JK05 382 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 TMEM82A0PJX8 343 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 ZNF737O75373 536 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 PEX14O75381 377 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 ATP5HO75947 161 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 HAND1O96004 215 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 OCM2P0CE71 109 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
TPM3-219ENST00000509409 IGHV1-8P0DP01 117 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 CALCBP10092 127 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 POU3F4P49335 361 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 RBP2P50120 134 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 SNU13P55769 128 aaKnown RBP12.44□□□□□ -0.42
TPM3-219ENST00000509409 CDC42P60953 191 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 MEF2CQ06413 473 aaPredicted RBP12.44□□□□□ -0.42
TPM3-219ENST00000509409 TMED1Q13445 227 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 GRK1Q15835 563 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 TP53I3Q53FA7 332 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 TMEM219Q86XT9 240 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 Q8IYB0 196 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 ENTHD1Q8IYW4 607 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 OR8H2Q8N162 312 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 LYG1Q8N1E2 194 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 PRSS35Q8N3Z0 413 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 ZNF676Q8N7Q3 588 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 EME1Q96AY2 570 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 C10orf35Q96D05 121 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 CHST5Q9GZS9 411 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 CHST6Q9GZX3 395 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 GLS2Q9UI32 602 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
TPM3-219ENST00000509409 LOC107986453A0A1B0GWG9 222 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 SAC3D1A6NKF1 404 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 VGLL3A8MV65 326 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 G3V4G9 280 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 H3BUI4 141 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 RBP4P02753 201 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 UBCP0CG48 685 aaKnown RBP12.43□□□□□ -0.42
TPM3-219ENST00000509409 ZNF20P17024 532 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 DUSP1P28562 367 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 MTCP1P56278 107 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 HABP2Q14520 560 aaPredicted RBP12.43□□□□□ -0.42
TPM3-219ENST00000509409 TMEM244Q5VVB8 128 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 ZNF626Q68DY1 528 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 CCBE1Q6UXH8 406 aaPredicted RBP12.43□□□□□ -0.42
TPM3-219ENST00000509409 FAM58AQ8N1B3 248 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 TPRX1Q8N7U7 411 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 OR11H6Q8NGC7 330 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 NDNFQ8TB73 568 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 PP6455Q8WZ26 134 aa12.43□□□□□ -0.42
TPM3-219ENST00000509409 CFHR4Q92496 578 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms