RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 Q6ZNB5 142 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 TMPRSS7Q7RTY8 843 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 AMZ2Q86W34 360 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 SLC22A24Q8N4F4 322 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 OR56B2PQ8NGI1 322 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 GNPNAT1Q96EK6 184 aaPredicted RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 RNF2Q99496 336 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 P2RX4Q99571 388 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 NICN1Q9BSH3 213 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 TBL1XR1Q9BZK7 514 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 GNG13Q9P2W3 67 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 NAT8Q9UHE5 227 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 C19orf53Q9UNZ5 99 aaPredicted RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 B9D1Q9UPM9 204 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 HIF3AQ9Y2N7 669 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 MKI67P46013 3256 aaKnown RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 IGKV1-8A0A0C4DH67 115 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 LOC107986453A0A1B0GWG9 222 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 H7BYZ3 331 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 SDCBPO00560 298 aaPredicted RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 ST8SIA3O43173 380 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 CD46P15529 392 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 HMGA1P17096 107 aaKnown RBP8.79□□□□□ -1
PDGFRA-207ENST00000509092 DTYMKP23919 212 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 GRK6P43250 576 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 FOXK1P85037 733 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 PRSS8Q16651 343 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 ALG10Q5BKT4 473 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 PLAC9Q5JTB6 97 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 C1orf140Q5VVS0 124 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 ZNF547Q8IVP9 402 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 SULF2Q8IWU5 870 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 TMEM256Q8N2U0 113 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 D2HGDHQ8N465 521 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 CDRT4Q8N9R6 151 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 RASL10BQ96S79 203 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 SLC7A11Q9UPY5 501 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 ST3GAL6Q9Y274 331 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 LAMTOR2Q9Y2Q5 125 aa8.79□□□□□ -1
PDGFRA-207ENST00000509092 SCN3AQ9NY46 2000 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 A0A0A6YYD4 124 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 RAD51DO75771 328 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 SEMA4FO95754 770 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 DDAH2O95865 285 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 CTSDP07339 412 aaPredicted RBP8.78□□□□□ -1
PDGFRA-207ENST00000509092 HOXB2P14652 356 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 TCN2P20062 427 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 CST5P28325 142 aaPredicted RBP8.78□□□□□ -1
PDGFRA-207ENST00000509092 ASCL1P50553 236 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 MTCP1P56278 107 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 CSNK2A1P68400 391 aaPredicted RBP8.78□□□□□ -1
PDGFRA-207ENST00000509092 NTHL1P78549 312 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 ADIRFQ15847 76 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 FHL5Q5TD97 284 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 Q6ZWC4 215 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 COX15Q7KZN9 410 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 RNF44Q7L0R7 432 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 ZAR1Q86SH2 424 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 NPAS4Q8IUM7 802 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 NRSN1Q8IZ57 195 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 CSNK2A3Q8NEV1 391 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 OR4B1Q8NGF8 309 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 TOMM40LQ969M1 308 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 ADOQ96SZ5 270 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 LPAR5Q9H1C0 372 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 DOCK8Q8NF50 2099 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 TRAV30A0A087WSZ9 112 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 IGHV2OR16-5A0A0B4J2B6 119 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 LMX1BO60663 402 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 TRAPPC6AO75865 159 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 ISG15P05161 165 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 DBHP09172 617 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 DUSP1P28562 367 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 TPPP2P59282 170 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 PAFAH1B2P68402 229 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 OCIAD2Q56VL3 154 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 CST9LP1Q5W188 147 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 KCTD18Q6PI47 426 aaPredicted RBP8.78□□□□□ -1
PDGFRA-207ENST00000509092 OR2T10Q8NGZ9 312 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 RPUSD4Q96CM3 377 aaKnown RBP8.78□□□□□ -1
PDGFRA-207ENST00000509092 SMIM12Q96EX1 92 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 ZNF845Q96IR2 970 aaPredicted RBP8.78□□□□□ -1
PDGFRA-207ENST00000509092 AGMATQ9BSE5 352 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 UQCR10Q9UDW1 63 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 SLC5A6Q9Y289 635 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 WIPI2Q9Y4P8 454 aa8.78□□□□□ -1
PDGFRA-207ENST00000509092 A0A1W2PQ45 241 aaPredicted RBP8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 A0A1W2PQY0 241 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 SOCS1O15524 211 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 NUPR1O60356 82 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 LILRA1O75019 489 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 SNRNP200O75643 2136 aaKnown RBP8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 MMP23AO75900 390 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 IL33O95760 270 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 H2BFMP0C1H6 154 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 BMP5P22003 454 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 EFNA3P52797 238 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 PRDX1Q06830 199 aaKnown RBP8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 GNMTQ14749 295 aa8.77□□□□□ -1.01
PDGFRA-207ENST00000509092 CYP2G1PQ6ZSU1 146 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms