RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 TMEM239Q8WW34 195 aa2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 DERL3Q96Q80 235 aa2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 NXF2Q9GZY0 626 aaKnown RBP2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 METTL8Q9H825 291 aaKnown RBP2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 INIPQ9NRY2 104 aa2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 DDIT4Q9NX09 232 aa2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 CHMP5Q9NZZ3 219 aa2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 INSIG2Q9Y5U4 225 aa2.07□□□□□ -2.08
COL4A3BP-205ENST00000508692 MGAT4DA6NG13 374 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 CD300LBA8K4G0 201 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 hCG_2039718K7EN88 272 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 OR2A4O95047 310 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 IGKV1D-16P01601 117 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 RLN2P04090 185 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 CDK1P06493 297 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 RAB38P57729 211 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 MEF2CQ06413 473 aaPredicted RBP2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 BNIP2Q12982 314 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 BIKQ13323 160 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 ELOCQ15369 112 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 GUSBP1Q15486 140 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 CLLU1OSQ5K130 101 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZDHHC22Q8N966 263 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 ACBD4Q8NC06 268 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 NELFBQ8WX92 580 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 OR2A7Q96R45 310 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 THTPAQ9BU02 230 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 BEX2Q9BXY8 128 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 PRRG3Q9BZD7 231 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 LINC00574Q9H8X3 128 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 TAC3Q9UHF0 121 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 SLC22A7Q9Y694 548 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 COL1A2P08123 1366 aa2.06□□□□□ -2.08
COL4A3BP-205ENST00000508692 IGKV1D-17A0A075B6S4 117 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 LOC389332A0A1B0GUA5 103 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 C16orf90A8MZG2 172 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 K7ERQ8 282 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 PLPP3O14495 311 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 RGS5O15539 181 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 CST4P01036 141 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 NRASP01111 189 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 HRASP01112 189 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 KRASP01116 189 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 IGKV1-17P01599 117 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 SPAM1P38567 509 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 TUFMP49411 452 aaKnown RBP2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 GDI2P50395 445 aaKnown RBP2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 CEACAM16Q2WEN9 425 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZNF404Q494X3 552 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 KPRPQ5T749 579 aaPredicted RBP2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 FAM19A1Q7Z5A9 133 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 DRAXINQ8NBI3 349 aaPredicted RBP2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 OR8G5Q8NG78 346 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 OR4D6Q8NGJ1 314 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 C22orf15Q8WYQ4 148 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZNF396Q96N95 335 aaPredicted RBP2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 YPEL4Q96NS1 127 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 PEBP4Q96S96 227 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 PITX2Q99697 317 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 TMBIM4Q9HC24 238 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 CLEC2DQ9UHP7 191 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 KLF13Q9Y2Y9 288 aaPredicted RBP2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZNF780BQ9Y6R6 833 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 PCM1Q15154 2024 aa2.05□□□□□ -2.08
COL4A3BP-205ENST00000508692 A0A1B0GW15 77 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 GOLGA8IPA6NC78 632 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 UBDO15205 165 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 ENSAO43768 121 aaKnown RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 COX7A2P2O60397 106 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 FADS2O95864 444 aaKnown RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 CXorf1O96002 111 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 OR5AC1P0C628 307 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 TEAD1P28347 426 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 RPA3P35244 121 aaPredicted RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 TTPAP49638 278 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 CCL23P55773 120 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 GPR176Q14439 515 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 IGFBP7Q16270 282 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SSX1Q16384 188 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 TTMPQ5BVD1 217 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 UBE2NLQ5JXB2 153 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 HBMQ6B0K9 141 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 TBPL2Q6SJ96 375 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 DAZ4Q86SG3 579 aaKnown RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SGPP2Q8IWX5 399 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 COL27A1Q8IZC6 1860 aaPredicted RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SPICQ8N5J4 248 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZNF680Q8NEM1 530 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZNF555Q8NEP9 628 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 BLNKQ8WV28 456 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 IFT81Q8WYA0 676 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 NRCAMQ92823 1304 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 ZBED3Q96IU2 234 aaPredicted RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SEC22CQ9BRL7 303 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SRRQ9GZT4 340 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 USP42Q9H9J4 1324 aaKnown RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SND1-IT1Q9HBX3 110 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 DAZ1Q9NQZ3 744 aaKnown RBP2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 USH1CQ9Y6N9 552 aa2.04□□□□□ -2.08
COL4A3BP-205ENST00000508692 SCN1AP35498 2009 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms