RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CHRM2P08172 466 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 CD37P11049 281 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 RPS2P15880 293 aaKnown RBP16.81■□□□□ 0.28
USP53-203ENST00000507597 EGR1P18146 543 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 SDC2P34741 201 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 GABRA2P47869 451 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 TMBIM6P55061 237 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 FGF12P61328 243 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 DGUOKQ16854 277 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 ATPAF1Q5TC12 328 aaPredicted RBP16.81■□□□□ 0.28
USP53-203ENST00000507597 LINC00596Q86U02 117 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 CLVS1Q8IUQ0 354 aaPredicted RBP16.81■□□□□ 0.28
USP53-203ENST00000507597 OSR2Q8N2R0 312 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 ZNF488Q96MN9 340 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 WDR13Q9H1Z4 485 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 NARFLQ9H6Q4 476 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 KAAG1Q9UBP8 84 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 STEAP1Q9UHE8 339 aa16.81■□□□□ 0.28
USP53-203ENST00000507597 CEACAM18A8MTB9 384 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 SLC22A1O15245 554 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 GPR37O15354 613 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 ADAM20O43506 726 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 GABARAPO95166 117 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 IL1AP01583 271 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 GYPAP02724 150 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 PSG2P11465 335 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 ARSBP15848 533 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 PRDX2P32119 198 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 LSM3P62310 102 aaKnown RBP16.8■□□□□ 0.28
USP53-203ENST00000507597 ZNF146Q15072 292 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 C11orf91Q3C1V1 193 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 SLC22A6Q4U2R8 563 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 ESCO2Q56NI9 601 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 STUMQ69YW2 141 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 ZNF561Q8N587 486 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 Q8NFD4 153 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 CLDND2Q8NHS1 167 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 KCNG3Q8TAE7 436 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 RBFOX1Q9NWB1 397 aaKnown RBP16.8■□□□□ 0.28
USP53-203ENST00000507597 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
USP53-203ENST00000507597 IGHV3OR15-7A0A075B7D8 119 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 IGHV4-61A0A0C4DH41 118 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 IGKV1-12A0A0C4DH73 117 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 RFPL4AA6NLU0 287 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 IFITM5A6NNB3 132 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 RFPL4AL1F8VTS6 287 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 AIPO00170 330 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 TMPRSS2O15393 492 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 NDUFB3O43676 98 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 IGKV1D-12P01611 117 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 SERPINA2P20848 420 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 NPBWR2P48146 333 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 GZMKP49863 264 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 IL13RA1P78552 427 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 IL13RA2Q14627 380 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 LRRC10Q5BKY1 277 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 CRIP3Q6Q6R5 217 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 USP43Q70EL4 1123 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 LYPD6Q86Y78 171 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 OR4D6Q8NGJ1 314 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 ANGPTL6Q8NI99 470 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 OR14J1Q9UGF5 321 aa16.79■□□□□ 0.28
USP53-203ENST00000507597 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.78■□□□□ 0.28
USP53-203ENST00000507597 H7C1Q1 480 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 FOXH1O75593 365 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 IGHV2-5P01817 119 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 SFTPBP07988 381 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 WNT2P09544 360 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 CFPP27918 469 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 SERPINB10P48595 397 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 MXD1Q05195 221 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 NHLRC3Q5JS37 347 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 OR2W3Q7Z3T1 314 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 C1QL2Q7Z5L3 287 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 CHST4Q8NCG5 386 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 C19orf18Q8NEA5 215 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 OR51T1Q8NGJ9 327 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 URM1Q9BTM9 101 aaKnown RBP16.78■□□□□ 0.28
USP53-203ENST00000507597 CLN8Q9UBY8 286 aa16.78■□□□□ 0.28
USP53-203ENST00000507597 CCDC160A6NGH7 325 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 SIGLEC5O15389 551 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 CRTAPO75718 401 aaPredicted RBP16.77■□□□□ 0.28
USP53-203ENST00000507597 PITPNBP48739 271 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 SCAND1P57086 179 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 GNB2P62879 340 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 MPV17LQ2QL34 196 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 CD276Q5ZPR3 534 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 ZNF788Q6ZQV5 615 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 RNF144BQ7Z419 303 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 BATF2Q8N1L9 274 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 OR5T2Q8NGG2 359 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 OR5D13Q8NGL4 314 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 OR10K1Q8NGX5 313 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 FAM3DQ96BQ1 224 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 SDSLQ96GA7 329 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 CCL13Q99616 98 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 FAM234AQ9H0X4 552 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 SPACA1Q9HBV2 294 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 ST3GAL6Q9Y274 331 aa16.77■□□□□ 0.28
USP53-203ENST00000507597 FAM90A10PA6NDY2 464 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms