RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 SHFQ7M4L6 423 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 ERI1Q8IV48 349 aaKnown RBP11.07□□□□□ -0.64
DDR1-260ENST00000507533 TIGD4Q8IY51 512 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 PACRGLQ8N7B6 248 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 CSNK2A3Q8NEV1 391 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 OR8J1Q8NGP2 316 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 OR13D1Q8NGV5 346 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 OR6N2Q8NGY6 317 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 SDSLQ96GA7 329 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 LYZL4Q96KX0 146 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 RDH12Q96NR8 316 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 IL4I1Q96RQ9 567 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 MBOAT4Q96T53 435 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 TEAD3Q99594 435 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 SP140LQ9H930 580 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 HILPDAQ9Y5L2 63 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 CSMD3Q7Z407 3707 aa11.07□□□□□ -0.64
DDR1-260ENST00000507533 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 CCDC182A6NF36 153 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 ZNF850A8MQ14 1090 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 FAM90A22PA8MWA6 464 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 CASQ2O14958 399 aaPredicted RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 ANXA2P07355 339 aaKnown RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 PEX2P28328 305 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 CHATP28329 748 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 PRDX4Q13162 271 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 DYNC1I2Q13409 638 aaKnown RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 ZNF273Q14593 569 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 ZNF626Q68DY1 528 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 ZFAND6Q6FIF0 208 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 BCDIN3DQ7Z5W3 292 aaKnown RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 OR2T27Q8NH04 317 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 FAM81AQ8TBF8 368 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 OR5P3Q8WZ94 311 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 SLAMF6Q96DU3 332 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 RNF170Q96K19 258 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 SMPD3Q9NY59 655 aaPredicted RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 NKX1-2Q9UD57 310 aaPredicted RBP11.06□□□□□ -0.64
DDR1-260ENST00000507533 MPC1Q9Y5U8 109 aa11.06□□□□□ -0.64
DDR1-260ENST00000507533 SELENOFO60613 162 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 CFL1P23528 166 aaKnown RBP11.05□□□□□ -0.64
DDR1-260ENST00000507533 DCTDP32321 178 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 MYCNOSP40205 109 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 CX3CR1P49238 355 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 EIF2B1Q14232 305 aaKnown RBP11.05□□□□□ -0.64
DDR1-260ENST00000507533 SNCBQ16143 134 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 ABCA11PQ4W5N1 156 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 FAM76BQ5HYJ3 339 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 OGFRL1Q5TC84 451 aaPredicted RBP11.05□□□□□ -0.64
DDR1-260ENST00000507533 C16orf82Q7Z2V1 217 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 THAP5Q7Z6K1 395 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 CALHM1Q8IU99 346 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 GID4Q8IVV7 300 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 FTMTQ8N4E7 242 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 ZNF454Q8N9F8 522 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 OR11H6Q8NGC7 330 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 CAPSLQ8WWF8 208 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 AKR1E2Q96JD6 320 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 FGF23Q9GZV9 251 aaPredicted RBP11.05□□□□□ -0.64
DDR1-260ENST00000507533 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 IMPAD1Q9NX62 359 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 GMPPBQ9Y5P6 360 aa11.05□□□□□ -0.64
DDR1-260ENST00000507533 LOC100130705A0A1B0GUX0 176 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 C17orf98A8MV24 154 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 DLGAP1O14490 977 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 SLC16A6O15403 523 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 SNRPGP62308 76 aaKnown RBP11.04□□□□□ -0.64
DDR1-260ENST00000507533 RPL23AP62750 156 aaKnown RBP11.04□□□□□ -0.64
DDR1-260ENST00000507533 C18orf65Q6ZTR6 163 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 FAM57BQ71RH2 274 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 OTOSQ8NHW6 89 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 PIGCQ92535 297 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 ABHD6Q9BV23 337 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 YIPF3Q9GZM5 350 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 ABCB9Q9NP78 766 aa11.04□□□□□ -0.64
DDR1-260ENST00000507533 WARS2Q9UGM6 360 aaKnown RBP11.04□□□□□ -0.64
DDR1-260ENST00000507533 SH2D7A6NKC9 451 aaPredicted RBP11.03□□□□□ -0.64
DDR1-260ENST00000507533 RFPL4AA6NLU0 287 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 NUDT19A8MXV4 375 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 ZNF878C9JN71 531 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 RFPL4AL1F8VTS6 287 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 SLC1A7O00341 560 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 MTRF1O75570 445 aaKnown RBP11.03□□□□□ -0.64
DDR1-260ENST00000507533 PIPP12273 146 aaPredicted RBP11.03□□□□□ -0.64
DDR1-260ENST00000507533 HSD11B1P28845 292 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 HTR1FP30939 366 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 ECI1P42126 302 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 SLC15A1P46059 708 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 LUMP51884 338 aaPredicted RBP11.03□□□□□ -0.64
DDR1-260ENST00000507533 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
DDR1-260ENST00000507533 DLX6P56179 175 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 TMED1Q13445 227 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 SLC25A30Q5SVS4 291 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 OR2W3Q7Z3T1 314 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 OSR2Q8N2R0 312 aa11.03□□□□□ -0.64
DDR1-260ENST00000507533 CD177Q8N6Q3 437 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms