RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TAC1P20366 129 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 M6PRP20645 277 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 DEKP35659 375 aaKnown RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 TUFMP49411 452 aaKnown RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 ZNF235Q14590 738 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 ELOCQ15369 112 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 C18orf21Q32NC0 220 aaPredicted RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 WDR59Q6PJI9 974 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 CLEC18BQ6UXF7 455 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 ADM2Q7Z4H4 148 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 OR4C13Q8NGP0 309 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 OR2K2Q8NGT1 345 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 LGALS14Q8TCE9 139 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 CDKL2Q92772 493 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 ZBED3Q96IU2 234 aaPredicted RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 OR2A7Q96R45 310 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 API5Q9BZZ5 524 aaKnown RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 RAB1BQ9H0U4 201 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 VSIRQ9H7M9 311 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 TRIM45Q9H8W5 580 aaPredicted RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 ABCB9Q9NP78 766 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 PARP11Q9NR21 331 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 VAPAQ9P0L0 249 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 HMGXB4Q9UGU5 601 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 CLEC2DQ9UHP7 191 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 INSIG2Q9Y5U4 225 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 ZNF706Q9Y5V0 76 aaPredicted RBP1.68□□□□□ -2.14
LSM6-205ENST00000507449 SLC22A7Q9Y694 548 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 C2orf16Q68DN1 1984 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 ADGRL1O94910 1474 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 SHANK1Q9Y566 2161 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 SETD1AO15047 1707 aaKnown RBP1.67□□□□□ -2.14
LSM6-205ENST00000507449 LOC389332A0A1B0GUA5 103 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 A0A1B0GXF2 115 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 FFAR1O14842 300 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 ENSAO43768 121 aaKnown RBP1.67□□□□□ -2.14
LSM6-205ENST00000507449 CXorf1O96002 111 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 IGHG2P01859 326 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 IVLP07476 585 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 ZNF35P13682 527 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 SLC6A1P30531 599 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 LCN1P31025 176 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 SLC18A1P54219 525 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 FLI1Q01543 452 aaPredicted RBP1.67□□□□□ -2.14
LSM6-205ENST00000507449 TRDNQ13061 729 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 VAMP3Q15836 100 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 Q499Y3 187 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 IDNKQ5T6J7 187 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 OR5H2Q8NGV7 314 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 OR6K2Q8NGY2 324 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 OR8K3Q8NH51 312 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 UBA3Q8TBC4 463 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 PPP1R36Q96LQ0 422 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 GLT1D1Q96MS3 346 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 THTPAQ9BU02 230 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 OR2S2Q9NQN1 319 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 RBM22Q9NW64 420 aaKnown RBP eCLIP1.67□□□□□ -2.14
LSM6-205ENST00000507449 CYB5R1Q9UHQ9 305 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 R4GN34 69 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 TRIP11Q15643 1979 aa1.67□□□□□ -2.14
LSM6-205ENST00000507449 SYNRGQ9UMZ2 1314 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 TICRRQ7Z2Z1 1910 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 IGKV1OR2-108A0A075B7D4 117 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 RBFOX3A6NFN3 312 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 MGAT4DA6NG13 374 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 OR6C70A6NIJ9 312 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 E7EWF7 191 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 PSMD11O00231 422 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 ISLRO14498 428 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 S100A9P06702 114 aaKnown RBP1.66□□□□□ -2.14
LSM6-205ENST00000507449 SNRPAP09012 282 aaKnown RBP1.66□□□□□ -2.14
LSM6-205ENST00000507449 P0C880 135 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 CCL2P13500 99 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 HRES1P13985 223 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 CCNOP22674 350 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 HLA-DMAP28067 261 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 ACOT2P49753 483 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 FMODQ06828 376 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 BAMBIQ13145 260 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 SSX1Q16384 188 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 CLEC12AQ5QGZ9 265 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 LDLRAD2Q5SZI1 272 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 AADACL4Q5VUY2 407 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 RESP18Q5W5W9 173 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 TPGS1Q6ZTW0 290 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 TMEM144Q7Z5S9 345 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 OR51Q1Q8NH59 317 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 CLHC1Q8NHS4 586 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 DOK4Q8TEW6 326 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 C22orf15Q8WYQ4 148 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 CCL17Q92583 94 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 RBPMSQ93062 196 aaKnown RBP1.66□□□□□ -2.14
LSM6-205ENST00000507449 FMC1Q96HJ9 113 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 ZNF75AQ96N20 296 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 ZNF396Q96N95 335 aaPredicted RBP1.66□□□□□ -2.14
LSM6-205ENST00000507449 SIKE1Q9BRV8 207 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 NXF2Q9GZY0 626 aaKnown RBP1.66□□□□□ -2.14
LSM6-205ENST00000507449 POMKQ9H5K3 350 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 PLEKHA1Q9HB21 404 aa1.66□□□□□ -2.14
LSM6-205ENST00000507449 VCX3AQ9NNX9 186 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms