RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SETD3Q86TU7 594 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 ARHGAP18Q8N392 663 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 CCNYL1Q8N7R7 359 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 FAM184AQ8NB25 1140 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF555Q8NEP9 628 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 MUC7Q8TAX7 377 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 TOP1MTQ969P6 601 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 OR2A7Q96R45 310 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 SRRQ9GZT4 340 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 COA1Q9GZY4 146 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 ABCG5Q9H222 651 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 RAB23Q9ULC3 237 aa1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 MCTS1Q9ULC4 181 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-204ENST00000505804 NUP205Q92621 2012 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 MROH5Q6ZUA9 1318 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 A0A1W2PPV4 95 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 ANKRD20A5PA0PJZ0 165 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 ISLRO14498 428 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 RGS5O15539 181 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 RNF113AO15541 343 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 AQP9O43315 295 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 SNRPAP09012 282 aaKnown RBP1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 LIPCP11150 499 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 PRKACAP17612 351 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 WDR43Q15061 677 aaKnown RBP eCLIP1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 SSX1Q16384 188 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 NDUFAF6Q330K2 333 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 KRTAP25-1Q3LHN0 102 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 ASCL4Q6XD76 172 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 LY6G5BQ8NDX9 201 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 NT5CQ8TCD5 201 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 ASB7Q9H672 318 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 DDIT4Q9NX09 232 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 TAC3Q9UHF0 121 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 INSIG2Q9Y5U4 225 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 ICOSQ9Y6W8 199 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 SPATA31E1Q6ZUB1 1445 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 KIF27Q86VH2 1401 aa1.74□□□□□ -2.13
TOPBP1-204ENST00000505804 DYSFO75923 2080 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF878C9JN71 531 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 E7EQL1 145 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 J3QRE1 110 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 M0R1B8 84 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 GMDSO60547 372 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 TRGV3P03979 118 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 HOXB8P17481 243 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 P2RY2P41231 377 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 FOXA1P55317 472 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 DYNC1I2Q13409 638 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 ENDOGQ14249 297 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF321PQ8N8H1 164 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 OR8S1Q8NH09 359 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF75AQ96N20 296 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 OR2M4Q96R27 311 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 SLC38A1Q9H2H9 487 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 C12orf4Q9NQ89 552 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 FLVCR2Q9UPI3 526 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 ACOT9Q9Y305 439 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 MMACHCQ9Y4U1 282 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 TRAPPC1Q9Y5R8 145 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF706Q9Y5V0 76 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 AQRO60306 1485 aaKnown RBP eCLIP1.73□□□□□ -2.134e-6■□□□□ 10.8
TOPBP1-204ENST00000505804 MYO16Q9Y6X6 1858 aa1.73□□□□□ -2.13
TOPBP1-204ENST00000505804 PCNX2A6NKB5 2137 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 IGLV10-54A0A075B6I4 117 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 TRAV8-7A0A075B6U6 113 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 LOC389332A0A1B0GUA5 103 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 GMNCA6NCL1 334 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 SEC14L6B5MCN3 397 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 D6RAR5 112 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 ALOX12BO75342 701 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 TAC1P20366 129 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 IMPA1P29218 277 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 SLC18A1P54219 525 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 TOMM34Q15785 309 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 TAL2Q16559 108 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 CLLU1OSQ5K130 101 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 SYT6Q5T7P8 510 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 CLEC18BQ6UXF7 455 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 LINC00596Q86U02 117 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 NELFCDQ8IXH7 590 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 AMN1Q8IY45 258 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 EIF4E3Q8N5X7 224 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 OR2K2Q8NGT1 345 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 C22orf15Q8WYQ4 148 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 RILPQ96NA2 401 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 ZNF780BQ9Y6R6 833 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 LTBP2Q14767 1821 aa1.72□□□□□ -2.13
TOPBP1-204ENST00000505804 FBN1P35555 2871 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 SLC5A10A0PJK1 596 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 TVP23AA6NH52 213 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 C3orf84H3BNL1 204 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 K7EN84 100 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 K7EPK0 472 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 GATCO43716 136 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 SYNGR2O43760 224 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 COX7A2P2O60397 106 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 RLN2P04090 185 aa1.71□□□□□ -2.14
TOPBP1-204ENST00000505804 PTHLHP12272 177 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms