RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CD55P08174 381 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 HSD17B1P14061 328 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 GNB3P16520 340 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 FMO3P31513 532 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 Q0VFX4 171 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 ATAD3CQ5T2N8 411 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 OPN5Q6U736 354 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 OAFQ86UD1 273 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 UMODL1-AS1Q8N2C9 162 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 C6orf223Q8N319 242 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 FAAP24Q9BTP7 215 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 NMNAT1Q9HAN9 279 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-204ENST00000504430 DOK5Q9P104 306 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 LSM5Q9Y4Y9 91 aaKnown RBP4.17□□□□□ -1.74
NIPBL-204ENST00000504430 TTC3P53804 2025 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 OR2B3O76000 313 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 KCNK2O95069 426 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 SOX14O95416 240 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 SEMA4FO95754 770 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 EPPINO95925 133 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 PDYNP01213 254 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 C1GALT1C1LP0DN25 315 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 LIFP15018 202 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 IL2RGP31785 369 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 GDF5P43026 501 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 SERPINB10P48595 397 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 RRAS2P62070 204 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-204ENST00000504430 PRDX4Q13162 271 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 JOSD1Q15040 202 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF630Q2M218 657 aaPredicted RBP4.17□□□□□ -1.74
NIPBL-204ENST00000504430 C9orf64Q5T6V5 341 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 LEMD1Q68G75 181 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 DOLPP1Q86YN1 238 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 OR52L1Q8NGH7 329 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 SEC22AQ96IW7 307 aa4.17□□□□□ -1.74
NIPBL-204ENST00000504430 SLIRPQ9GZT3 109 aaKnown RBP4.17□□□□□ -1.74
NIPBL-204ENST00000504430 GAGE7O76087 117 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR7C1O76099 320 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 GAGE12FP0CL80 117 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 GAGE12GP0CL81 117 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 GAGE12IP0CL82 117 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR13C7P0DN81 318 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 CA6P23280 308 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 CD70P32970 193 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 RCVRNP35243 200 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 MYCNOSP40205 109 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 KIR2DS2P43631 304 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 GAGE4Q13068 117 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR2B11Q5JQS5 317 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 TMEM78Q5T7P6 136 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 SNX29P2Q8IUI4 249 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR6F1Q8NGZ6 308 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR13C6PQ8NH95 151 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 BTF3L4Q96K17 158 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 KLF6Q99612 283 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 GNB1LQ9BYB4 327 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 UQCC1Q9NVA1 299 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 RTL9Q8NET4 1388 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 WRNQ14191 1432 aaPredicted RBP eCLIP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 A0A087WX48 190 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 IGLV5-39A0A0G2JS06 123 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 SCO2A0A1W2PP80 73 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 CHST10O43529 356 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 FOLR2P14207 255 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 CD99P14209 185 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 SPNP16150 400 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 NUDT1P36639 197 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 PLPPR5Q32ZL2 321 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OTPQ5XKR4 325 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 DNAJC24Q6P3W2 148 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF485Q8NCK3 441 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR10A6Q8NH74 314 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 APOBEC3DQ96AK3 386 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 EFCAB11Q9BUY7 163 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 A0A087WWV3 80 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 IGHV4-61A0A0C4DH41 118 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 A0A1B0GXF2 115 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR5H1A6NKK0 313 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 XKRYO14609 159 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 TCF21O43680 179 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 STK16O75716 305 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 IGHV4-59P01825 116 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 COX4I1P13073 169 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 GPR6P46095 362 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 MFAP2P55001 183 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 HNRNPA0Q13151 305 aaKnown RBP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF343Q6P1L6 599 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 CARM1Q86X55 608 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 OR2M7Q8NG81 312 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF689Q96CS4 500 aaPredicted RBP4.16□□□□□ -1.74
NIPBL-204ENST00000504430 ZC2HC1AQ96GY0 325 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF382Q96SR6 550 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 TAS2R5Q9NYW4 299 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 HDGFL3Q9Y3E1 203 aa4.16□□□□□ -1.74
NIPBL-204ENST00000504430 EEF1E1-BLOC1S5C9J1V9 151 aa4.15□□□□□ -1.74
NIPBL-204ENST00000504430 EEF1E1O43324 174 aaKnown RBP4.15□□□□□ -1.74
NIPBL-204ENST00000504430 GNG7O60262 68 aa4.15□□□□□ -1.74
NIPBL-204ENST00000504430 CCDC22O60826 627 aa4.15□□□□□ -1.74
NIPBL-204ENST00000504430 SULT1A3P0DMM9 295 aa4.15□□□□□ -1.74
NIPBL-204ENST00000504430 SULT1A4P0DMN0 295 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms