RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 Q8IYB0 196 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 BATF2Q8N1L9 274 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
PRDM2-213ENST00000503842 FAM46BQ96A09 425 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
PRDM2-213ENST00000503842 SPG11Q96JI7 2443 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 TM2D1Q9BX74 207 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 TMEM59Q9BXS4 323 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 LPAR5Q9H1C0 372 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 ABCG5Q9H222 651 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 BANF2Q9H503 90 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 TANC2Q9HCD6 1990 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 PCDHB16Q9NRJ7 776 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 PPP1R3CQ9UQK1 317 aa11.22□□□□□ -0.61
PRDM2-213ENST00000503842 SRRM5B3KS81 715 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.21□□□□□ -0.61
PRDM2-213ENST00000503842 RGS5O15539 181 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 AKR7A2O43488 359 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 LHBP01229 141 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 GHRHP01286 108 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 CSTBP04080 98 aaKnown RBP11.21□□□□□ -0.61
PRDM2-213ENST00000503842 GTF2F2P13984 249 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 EGR1P18146 543 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 ELK1P19419 428 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 TNFSF8P32971 234 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 CDKN1AP38936 164 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 ART1P52961 327 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 RPS27AP62979 156 aaKnown RBP11.21□□□□□ -0.61
PRDM2-213ENST00000503842 NHLRC3Q5JS37 347 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 LRRC28Q86X40 367 aaPredicted RBP11.21□□□□□ -0.61
PRDM2-213ENST00000503842 FAM58AQ8N1B3 248 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 GCSAMQ8N6F7 178 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 OR51T1Q8NGJ9 327 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 OR11L1Q8NGX0 322 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 RAB40AQ8WXH6 277 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 Q96M66 194 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 HMG20AQ9NP66 347 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 RNF7Q9UBF6 113 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 ADAM30Q9UKF2 790 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 CACNG2Q9Y698 323 aa11.21□□□□□ -0.61
PRDM2-213ENST00000503842 A0A0A6YYD4 124 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 IFNL4K9M1U5 179 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 WNT9BO14905 357 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 NXPH2O95156 264 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 S100A5P33763 92 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 RBMXP38159 391 aaKnown RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 RBM11P57052 281 aaKnown RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 HOXA4Q00056 320 aaPredicted RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 LSAMPQ13449 338 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 IL13RA2Q14627 380 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 CNIH2Q6PI25 160 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 ACP7Q6ZNF0 438 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 CCDC190Q86UF4 302 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 EMG1Q92979 244 aaKnown RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 YIPF5Q969M3 257 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 CCL19Q99731 98 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 URM1Q9BTM9 101 aaKnown RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 SELENOIQ9C0D9 397 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 TMEM106BQ9NUM4 274 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 DCAF16Q9NXF7 216 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 RASL12Q9NYN1 266 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 IL36RNQ9UBH0 155 aa11.2□□□□□ -0.62
PRDM2-213ENST00000503842 GCN1Q92616 2671 aaKnown RBP11.2□□□□□ -0.62
PRDM2-213ENST00000503842 IGHV1-69-2A0A0G2JMI3 117 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 FOXI3A8MTJ6 420 aaPredicted RBP11.19□□□□□ -0.62
PRDM2-213ENST00000503842 FAM25AB3EWG3 89 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 FAM25CB3EWG5 89 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 FAM25GB3EWG6 89 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 TMEM178BH3BS89 294 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 RAB27BO00194 218 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 RP2O75695 350 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 CYB5R3P00387 301 aaPredicted RBP11.19□□□□□ -0.62
PRDM2-213ENST00000503842 PRKACAP17612 351 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 GLRA1P23415 457 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 CPT2P23786 658 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 ETV6P41212 452 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 SMIM21Q3B7S5 101 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 PIGYQ3MUY2 71 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 FAM90A1Q86YD7 464 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 OR4M1Q8NGD0 313 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 SOSTQ9BQB4 213 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 NICN1Q9BSH3 213 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 ATG5Q9H1Y0 275 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 WDR13Q9H1Z4 485 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 LIME1Q9H400 295 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 AKIP1Q9NQ31 210 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 TREM2Q9NZC2 230 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 ST3GAL6Q9Y274 331 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 NPTNQ9Y639 398 aa11.19□□□□□ -0.62
PRDM2-213ENST00000503842 UTP20O75691 2785 aaKnown RBP11.19□□□□□ -0.62
PRDM2-213ENST00000503842 A0A0A6YYH2 397 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms