RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SFT2D2O95562 160 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 F10P00742 488 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 IL2RAP01589 272 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 HPXP02790 462 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 FBP1P09467 338 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 FABP4P15090 132 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 SNU13P55769 128 aaKnown RBP6.5□□□□□ -1.37
PDGFC-203ENST00000502773 DHRS2Q13268 280 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 SRSF7Q16629 238 aaKnown RBP eCLIP6.5□□□□□ -1.37
PDGFC-203ENST00000502773 ATPAF1Q5TC12 328 aaPredicted RBP6.5□□□□□ -1.37
PDGFC-203ENST00000502773 PLCXD3Q63HM9 321 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 TMEM211Q6ICI0 200 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 UQCC3Q6UW78 93 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF573Q86YE8 665 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 LRRC18Q8N456 261 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 FNDC9Q8TBE3 224 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 C2orf50Q96LR7 162 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 MICU1Q9BPX6 476 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 PLEKHA2Q9HB19 425 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 GPR35Q9HC97 309 aa6.5□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF701Q9NV72 531 aaPredicted RBP6.5□□□□□ -1.37
PDGFC-203ENST00000502773 C9orf170A2RU37 121 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 TRAPPC2LH3BP13 241 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 H3BSH0 61 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 RPL36A-HNRNPH2H7BZ11 118 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 M0QYG6 137 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 PTBP3O95758 552 aaKnown RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CSN2P05814 226 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CALCRP30988 508 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OTX1P32242 354 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 GPX4P36969 197 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 UBE2NP61088 152 aaKnown RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 NAAAQ02083 359 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 TLE4Q04727 773 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR1C1Q15619 314 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR2A2Q6IF42 318 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 TMEM108Q6UXF1 575 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 MOB3CQ70IA8 216 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 KCTD9Q7L273 389 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OSR2Q8N2R0 312 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 BPIFCQ8NFQ6 507 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR2M7Q8NG81 312 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CORO2AQ92828 525 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 LPAR5Q9H1C0 372 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 C13orf42A0A1B0GVH6 325 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR5B21A6NL26 309 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CTSDP07339 412 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 IL11P20809 199 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 SERPINA2P20848 420 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CDAP32320 146 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 HRH1P35367 487 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 IDH3GP51553 393 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 ARG2P78540 354 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 VAMP3Q15836 100 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 NKPD1Q17RQ9 610 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CEACAM16Q2WEN9 425 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 LGALSLQ3ZCW2 172 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 C1orf185Q5T7R7 199 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CMTM1Q8IZ96 169 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 BVESQ8NE79 360 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR5M1Q8NGP8 315 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CASTOR1Q8WTX7 329 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 GLYATL2Q8WU03 294 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 RNF166Q96A37 237 aaPredicted RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR2H1Q9GZK4 316 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 GPR160Q9UJ42 338 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 SIAH2O43255 324 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 BCL2L11O43521 198 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 FUT3P21217 361 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 CSRP1P21291 193 aaKnown RBP6.49□□□□□ -1.37
PDGFC-203ENST00000502773 EFNB2P52799 333 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 GNMTQ14749 295 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 MPV17LQ2QL34 196 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 SSX8Q7RTT4 187 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 LGI3Q8N145 548 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 KCNRGQ8N5I3 272 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 ST6GALNAC5Q9BVH7 336 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 OR51B6Q9H340 312 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 PIGMQ9H3S5 423 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF442Q9H7R0 627 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 SLC2A9Q9NRM0 540 aa6.49□□□□□ -1.37
PDGFC-203ENST00000502773 EFNA2O43921 213 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 TK1P04183 234 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ABOP16442 354 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 CXCL3P19876 107 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 BTF3P20290 206 aaKnown RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 SORDQ00796 357 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 ENDOGQ14249 297 aaKnown RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 DCAF10Q5QP82 559 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 TFAP2EQ6VUC0 442 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 NHLRC1Q6VVB1 395 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 MOB1BQ7L9L4 216 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 REC114Q7Z4M0 266 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 DVL3Q92997 716 aaPredicted RBP6.48□□□□□ -1.37
PDGFC-203ENST00000502773 PECRQ9BY49 303 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 CDH20Q9HBT6 801 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 CACFD1Q9UGQ2 172 aa6.48□□□□□ -1.37
PDGFC-203ENST00000502773 POLDIP2Q9Y2S7 368 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms