RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 COMMD1Q8N668 190 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 OR2T27Q8NH04 317 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 NDNFQ8TB73 568 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 CHPT1Q8WUD6 406 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 REEP6Q96HR9 211 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 C1orf21Q9H246 121 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 SP140LQ9H930 580 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 LYVE1Q9Y5Y7 322 aa5.95□□□□□ -1.46
VPS45-210ENST00000497638 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
VPS45-210ENST00000497638 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 H0YIZ8 118 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 MTRF1O75570 445 aaKnown RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 FRMD6-AS1P0C7T7 363 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 ZNF728P0DKX0 622 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 ZNF823P16415 610 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 DCTDP32321 178 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 INSL3P51460 131 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 PRKXP51817 358 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 TAF13Q15543 124 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 SMIM21Q3B7S5 101 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 C9orf152Q5JTZ5 239 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 ERICH5Q6P6B1 374 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 KCTD8Q6ZWB6 473 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 KRT77Q7Z794 578 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 ZNF329Q86UD4 541 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 ANKRD42Q8N9B4 389 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 OR4M1Q8NGD0 313 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 OR4Q3Q8NH05 313 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 OR8U1Q8NH10 309 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 OR5P3Q8WZ94 311 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 RSRC1Q96IZ7 334 aaKnown RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 RBM14Q96PK6 669 aaKnown RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 NMNAT3Q96T66 252 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 TM2D3Q9BRN9 247 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 CCDC28BQ9BUN5 200 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 TINAGL1Q9GZM7 467 aaPredicted RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 NSRP1Q9H0G5 558 aaKnown RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 ANKRD19PQ9H560 264 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 RABEP2Q9H5N1 569 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 YY1AP1Q9H869 796 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 RPRD1BQ9NQG5 326 aaKnown RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 MRPL22Q9NWU5 206 aaKnown RBP5.94□□□□□ -1.46
VPS45-210ENST00000497638 RHCGQ9UBD6 479 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 RHBDD3Q9Y3P4 386 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 N6AMT1Q9Y5N5 214 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 DSCAML1Q8TD84 2053 aa5.94□□□□□ -1.46
VPS45-210ENST00000497638 ZNF878C9JN71 531 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 M0QYG6 137 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 FFAR1O14842 300 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 ARPC3O15145 178 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 CST4P01036 141 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 ANXA2P07355 339 aaKnown RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 YAP1P46937 504 aaKnown RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 FXYD6P3P58550 94 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 GRB2P62993 217 aaKnown RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 SELENOWP63302 87 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 SLC35B1P78383 322 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 PRDX4Q13162 271 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 LRRC23Q53EV4 343 aaPredicted RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 KLHL12Q53G59 568 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 FGD3Q5JSP0 725 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 TBPL2Q6SJ96 375 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 ZBTB49Q6ZSB9 765 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 OVCH2Q7RTZ1 564 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 ZNF671Q8TAW3 534 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 BCAS4Q8TDM0 211 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 SGK3Q96BR1 496 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 SLAMF6Q96DU3 332 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 RBMXL1Q96E39 390 aaKnown RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 TPD52L3Q96J77 140 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 RNF170Q96K19 258 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 ERMAPQ96PL5 475 aaPredicted RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 DUX3Q96PT4 197 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 SH3GL1Q99961 368 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 RGCCQ9H4X1 137 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 PPP1R3EQ9H7J1 279 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 TBC1D23Q9NUY8 699 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 RASL12Q9NYN1 266 aa5.93□□□□□ -1.46
VPS45-210ENST00000497638 SIRT4Q9Y6E7 314 aaPredicted RBP5.93□□□□□ -1.46
VPS45-210ENST00000497638 IGHV2-26A0A0B4J1V2 119 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 SH2D7A6NKC9 451 aaPredicted RBP5.92□□□□□ -1.46
VPS45-210ENST00000497638 RFPL4AA6NLU0 287 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 ZNF850A8MQ14 1090 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 RFPL4AL1F8VTS6 287 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 J3KTA2 159 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 LDLRAD4O15165 306 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 SLC22A2O15244 555 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 APOC1P02654 83 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 SNRNP70P08621 437 aaKnown RBP5.92□□□□□ -1.46
VPS45-210ENST00000497638 PIPP12273 146 aaPredicted RBP5.92□□□□□ -1.46
VPS45-210ENST00000497638 HIST1H1CP16403 213 aaKnown RBP5.92□□□□□ -1.46
VPS45-210ENST00000497638 HTR1DP28221 377 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 SLC6A6P31641 620 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 KDELR2P33947 212 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 RPS27P42677 84 aaKnown RBP5.92□□□□□ -1.46
VPS45-210ENST00000497638 SLC15A1P46059 708 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 CX3CR1P49238 355 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 ACTA2P62736 377 aa5.92□□□□□ -1.46
VPS45-210ENST00000497638 GNG3P63215 75 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms