RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, human

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3GAP1-206	ENST00000497080	MRPS2	Q9Y399	296 aa	Known RBP	2.59	□□□□□ -1.99
RAB3GAP1-206	ENST00000497080	EXOSC1	Q9Y3B2	195 aa	Known RBP	2.59	□□□□□ -1.99
RAB3GAP1-206	ENST00000497080	C5	P01031	1676 aa		2.59	□□□□□ -2
RAB3GAP1-206	ENST00000497080	COL1A2	P08123	1366 aa		2.59	□□□□□ -2
RAB3GAP1-206	ENST00000497080	LAMB4	A4D0S4	1761 aa		2.59	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SCN11A	Q9UI33	1791 aa		2.59	□□□□□ -2
RAB3GAP1-206	ENST00000497080	NAV1	Q8NEY1	1877 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	PTPRF	P10586	1907 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	DUOX1	Q9NRD9	1551 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	MYH9	P35579	1960 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TOPAZ1	Q8N9V7	1692 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080		A0A087WUJ7	227 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	FXYD6-FXYD2	A0A087WZ82	144 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TRBV7-9	A0A0J9YWB2	115 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TMEM269	A0A1B0GVZ9	245 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SERTM2	A0A1B0GWG4	89 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TRDV1	A0A1B0GX56	115 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SLC5A10	A0PJK1	596 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	XKRY2	A2RUG3	117 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ARRDC5	A6NEK1	342 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR5H1	A6NKK0	313 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	COLCA2	A8K830	154 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TMEM238	C9JI98	176 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	PPP5D1	E7EU14	171 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	NPIPA7	E9PJI5	369 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	GPR31	O00270	319 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TNFRSF11B	O00300	401 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	MFNG	O00587	321 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	AZIN1	O14977	448 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	HMGB3	O15347	200 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SLC16A4	O15374	487 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ARPC5	O15511	151 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	B4GALT5	O43286	388 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	PPIH	O43447	177 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	GSTZ1	O43708	216 aa	Predicted RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	DNAJB6	O75190	326 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR4F21	O95013	312 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	UBL3	O95164	117 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SIX6	O95475	246 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	C6orf47	O95873	294 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	IGSF6	O95976	241 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	RPN2	P04844	631 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	IL3	P08700	152 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR8U8	P0C7N1	319 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	NPIPA8	P0DM63	369 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ZNF35	P13682	527 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TPT1	P13693	172 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ZNF44	P15621	663 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	NCK1	P16333	377 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SDC1	P18827	310 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	CD82	P27701	267 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	PSMB6	P28072	239 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	CD1B	P29016	333 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ADORA1	P30542	326 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	GNRHR	P30968	328 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	CCR1	P32246	355 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	MAS1L	P35410	378 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	BDKRB1	P46663	353 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	STK19	P49842	368 aa	Predicted RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TDGF1P3	P51864	188 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	DAOA	P59103	153 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SNRPG	P62308	76 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	RPL32	P62910	135 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	MRPS11	P82912	194 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OGDH	Q02218	1023 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SLC10A7	Q0GE19	358 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	PJVK	Q0ZLH3	352 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SCGB2A2	Q13296	93 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SNTB2	Q13425	540 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TPBG	Q13641	420 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	EIF2B1	Q14232	305 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TAF9	Q16594	264 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	TMEM241	Q24JQ0	296 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	C2orf76	Q3KRA6	126 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SCGB2B2	Q4G0G5	96 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	C10orf120	Q5SQS8	335 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	LIPK	Q5VXJ0	399 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	NKAIN2	Q5VXU1	208 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ZNF660	Q6AZW8	331 aa	Predicted RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR4F3	Q6IEY1	312 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR8G2P	Q6IF36	304 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR52W1	Q6IF63	320 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ADNP2	Q6IQ32	1131 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	LAIR2	Q6ISS4	152 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	RPL22L1	Q6P5R6	122 aa	Known RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	DRAM2	Q6UX65	266 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	CD300LG	Q6UXG3	332 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	CASP12	Q6UXS9	341 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	LANCL3	Q6ZV70	420 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	UNC93A	Q86WB7	457 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	ZNF573	Q86YE8	665 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	CBLN2	Q8IUK8	224 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SLC30A8	Q8IWU4	369 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	BAP18	Q8IXM2	172 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	PRSS58	Q8IYP2	241 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	DCAF4L2	Q8NA75	395 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	SDR9C7	Q8NEX9	313 aa		2.58	□□□□□ -2
RAB3GAP1-206	ENST00000497080	OR2M7	Q8NG81	312 aa		2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms