RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 RAB6AP20340 208 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 KITLGP21583 273 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 GLRXP35754 106 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 TRIQKQ629K1 86 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 HAGHLQ6PII5 290 aaPredicted RBP14.4□□□□□ -0.1
LMNA-216ENST00000496738 OR2W3Q7Z3T1 314 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 WDR86Q86TI4 376 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 SLAMF9Q96A28 289 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 CST11Q9H112 138 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 METTL9Q9H1A3 318 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 LPAR5Q9H1C0 372 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 ATP23Q9Y6H3 246 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 A0A0A6YYD4 124 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 TUBG1P23258 451 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 PITPNAQ00169 270 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 FLI1Q01543 452 aaPredicted RBP14.4□□□□□ -0.1
LMNA-216ENST00000496738 BAIAP2L2Q6UXY1 529 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 ST8SIA4Q92187 359 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 PTX4Q96A99 478 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 PLPPR2Q96GM1 343 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 THAP7Q9BT49 309 aaPredicted RBP14.4□□□□□ -0.1
LMNA-216ENST00000496738 SELENOIQ9C0D9 397 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 TUBG2Q9NRH3 451 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 PCDHB16Q9NRJ7 776 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 TMEM100Q9NV29 134 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 NDRG3Q9UGV2 375 aa14.4□□□□□ -0.1
LMNA-216ENST00000496738 ELF5Q9UKW6 265 aaPredicted RBP14.4□□□□□ -0.1
LMNA-216ENST00000496738 DIDO1Q9BTC0 2240 aaKnown RBP14.4□□□□□ -0.1
LMNA-216ENST00000496738 MEIOCA2RUB1 952 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 METTL21EPA6NDL7 271 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 PYCARD-AS1I3L0S3 204 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 SYNGR1O43759 233 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 ALDH3B1P43353 468 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 CHST4Q8NCG5 386 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 SETD6Q8TBK2 473 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 LRRC46Q96FV0 321 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 RTL8AQ9BWD3 113 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 CADP27708 2225 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 WIPF3A6NGB9 483 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 F5H5P2 479 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 CSTBP04080 98 aaKnown RBP14.39□□□□□ -0.11
LMNA-216ENST00000496738 SFTPBP07988 381 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 KLF3P57682 345 aaPredicted RBP14.39□□□□□ -0.11
LMNA-216ENST00000496738 GNG3P63215 75 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 GUCA2AQ02747 115 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 TFF3Q07654 80 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 BTN1A1Q13410 526 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 OR51T1Q8NGJ9 327 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 ITLN2Q8WWU7 325 aaPredicted RBP14.39□□□□□ -0.11
LMNA-216ENST00000496738 ZNF488Q96MN9 340 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 MICU1Q9BPX6 476 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 MRPL37Q9BZE1 423 aaKnown RBP14.39□□□□□ -0.11
LMNA-216ENST00000496738 NGBQ9NPG2 151 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 GHRLQ9UBU3 117 aa14.39□□□□□ -0.11
LMNA-216ENST00000496738 MEIS3P1A6NDR6 274 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 TUBAL3A6NHL2 446 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 OR5B21A6NL26 309 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 SOCS1O15524 211 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 FCER2P06734 321 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 GRPP07492 148 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 RBMXP38159 391 aaKnown RBP14.38□□□□□ -0.11
LMNA-216ENST00000496738 NPBWR2P48146 333 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 GZMKP49863 264 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 SNU13P55769 128 aaKnown RBP14.38□□□□□ -0.11
LMNA-216ENST00000496738 C1orf174Q8IYL3 243 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 TCTE3Q8IZS6 198 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 ZNF843Q8N446 348 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 C19orf18Q8NEA5 215 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 SAV1Q9H4B6 383 aaPredicted RBP14.38□□□□□ -0.11
LMNA-216ENST00000496738 CA10Q9NS85 328 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 FBLN5Q9UBX5 448 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 ADGRG4Q8IZF6 3080 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 ZFYVE26Q68DK2 2539 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 EPG5Q9HCE0 2579 aa14.38□□□□□ -0.11
LMNA-216ENST00000496738 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 RAB27BO00194 218 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 SLC22A5O76082 557 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 BCL3P20749 454 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 INPP1P49441 399 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 SRP9P49458 86 aaKnown RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 RPS27AP62979 156 aaKnown RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 OR52I2Q8NH67 350 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 NEUROG1Q92886 237 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 ESRP2Q9H6T0 727 aaKnown RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 COA4Q9NYJ1 87 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 ZNF581Q9P0T4 197 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 F8VVB4 439 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 F8VWA3 439 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 RHBDL1O75783 438 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 C1QL1O75973 258 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 GABRR1P24046 479 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 RPS23P62266 143 aaKnown RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 AANATQ16613 207 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 NCMAPQ5T1S8 102 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 ZNF57Q68EA5 555 aaPredicted RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 SSX8Q7RTT4 187 aa14.37□□□□□ -0.11
LMNA-216ENST00000496738 TINAGL1Q9GZM7 467 aaPredicted RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 NPDC1Q9NQX5 325 aaPredicted RBP14.37□□□□□ -0.11
LMNA-216ENST00000496738 RBFOX1Q9NWB1 397 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms