RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZNF286AQ9HBT8 521 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 KCNIP3Q9Y2W7 256 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 SPEF1Q9Y4P9 236 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 KMT2EQ8IZD2 1858 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 AHCTF1Q8WYP5 2266 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 CRYM-AS1A6NIL9 109 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 MPTX1A8MV57 137 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 CDK2AP1O14519 115 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 PDCD6O75340 191 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 TNFSF15O95150 251 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 IFNA21P01568 189 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 SFTPBP07988 381 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 SP1P08047 785 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 OPRM1P35372 400 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 PTGER4P35408 488 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 ARR3P36575 388 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 RRADP55042 308 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 RBM11P57052 281 aaKnown RBP9.58□□□□□ -0.88
CMSS1-208ENST00000496116 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 HES3Q5TGS1 186 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 C9orf135Q5VTT2 229 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 DHRS13Q6UX07 377 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 CCDC36Q8IYA8 594 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 POC1AQ8NBT0 407 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 APOBEC3DQ96AK3 386 aaPredicted RBP9.58□□□□□ -0.88
CMSS1-208ENST00000496116 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
CMSS1-208ENST00000496116 PAPOLGQ9BWT3 736 aaKnown RBP9.58□□□□□ -0.88
CMSS1-208ENST00000496116 ACKR4Q9NPB9 350 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 TAS2R3Q9NYW6 316 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 DNAJB11Q9UBS4 358 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 GPR160Q9UJ42 338 aa9.58□□□□□ -0.88
CMSS1-208ENST00000496116 C5orf49A4QMS7 147 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 H0YIZ8 118 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 NME2P1O60361 137 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 FUT3P21217 361 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 NME2P22392 152 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 PMELP40967 661 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 MEOX1P50221 254 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 RAB32Q13637 225 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 ABCA11PQ4W5N1 156 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 SLC25A26Q70HW3 274 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 MRPL21Q7Z2W9 205 aaKnown RBP9.57□□□□□ -0.88
CMSS1-208ENST00000496116 BAP18Q8IXM2 172 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 AQP10Q96PS8 301 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 SHARPINQ9H0F6 387 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 BARX1Q9HBU1 254 aaPredicted RBP9.57□□□□□ -0.88
CMSS1-208ENST00000496116 C12orf4Q9NQ89 552 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 GLS2Q9UI32 602 aa9.57□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A10PA6NDY2 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A18PA6NE21 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A16PA6NEW6 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A20PA6NIJ5 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A8PA6NJQ4 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A7PA6NKC0 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A22PA8MWA6 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A12PA8MX19 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A5PA8MXJ8 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A23PA8MXZ1 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 LGALS8O00214 317 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 MSTNO14793 375 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 KCNAB3O43448 404 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 ACTL6AO96019 429 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 HLA-HP01893 362 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A15PP0C7V4 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A13PP0C7W8 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A14PP0C7W9 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 FAM90A24PP0C7X0 464 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF728P0DKX0 622 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 CD79AP11912 226 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 CD46P15529 392 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 PIGPP57054 158 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 S100A10P60903 97 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 PPIAP62937 165 aaKnown RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 PLP2Q04941 152 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 ELP2Q6IA86 826 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 TMEM211Q6ICI0 200 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 SLC22A25Q6T423 547 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 CALHM1Q8IU99 346 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 SLC30A7Q8NEW0 376 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 OR56B2PQ8NGI1 322 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 TOMM40LQ969M1 308 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 OPA3Q9H6K4 179 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF442Q9H7R0 627 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 TMEM9BQ9NQ34 198 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 IL17BQ9UHF5 180 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 PRSS44E7EML9 344 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 TPD52L2O43399 206 aaKnown RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 OR7C1O76099 320 aaPredicted RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 GLP1RP43220 463 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 RAB1AP62820 205 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 EIF5AP63241 154 aaKnown RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 PRDX4Q13162 271 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 IL15RAQ13261 267 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 RBM39Q14498 530 aaKnown RBP9.56□□□□□ -0.88
CMSS1-208ENST00000496116 SMCO1Q147U7 214 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 SLC10A1Q14973 349 aa9.56□□□□□ -0.88
CMSS1-208ENST00000496116 IAH1Q2TAA2 248 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms